Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g03152 ATGGCTGATCTATTTGCGTGGCTTTTCTCCTTCTTCGCCCTTATTGCTTTAATTGTACTCGTTATTTACCAGTTAATGTGCCTGGCAGACCTTGAATTTGATTATATAAATCCTTATGATTCAACATCTCGAATAAACAAAGTGGTTTTGCCCGAGTATATTACATTAGGTGTCCTCTGCTGCTTCTACCTTGTAACAGGACACTGGATAATGTCACTGTTCTGCGCGCCTTACCTCTACTATAATGTGAGATTGTACAGGCAAGGAAAGCATTTGGTTGATGTTACAGAGATATTTAACATGCTAGCTTGGGAAAAGAAGCAACGGCTTTTCAAACTCTTCTATCTAATTTTTATCCTATTCCTCTCCTTGTTTTGGTTGATCTACACATCATTGGACGATGATTATGATTAG 414 0.3816 MADLFAWLFSFFALIALIVLVIYQLMCLADLEFDYINPYDSTSRINKVVLPEYITLGVLCCFYLVTGHWIMSLFCAPYLYYNVRLYRQGKHLVDVTEIFNMLAWEKKQRLFKLFYLIFILFLSLFWLIYTSLDDDYD 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g03152 137 Pfam Cornichon protein 5 125 IPR003377 GO:0016192
Trre15g03152 137 PANTHER CORNICHON-RELATED 4 129 - -
Trre15g03152 137 SMART Cornichon_2 4 125 IPR003377 GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g03152 Trre-Chr15 29220170 29223504 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g03152 K20368 - gmx:100799061 229.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g03152 15 29220170 29223504 Trre9g00460 9 3305193 3307768 PCT