Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g03117 ATGTTCACAGCAACCAAAGTAGCTTTCACATTAACACCCCCTCGTCTATGTTCTGCACCCCCAACACCATTCATTCCAATTTCTTCTTCATTTTCTCGTCCTCACTTCACTTCCCGCCACTTATGCCTTCGCCGGAGATTATTCCTACTTTCTCCTAAAGCCACCGCAGATCAAGGGAAGGTTGAAGAATTTGAAGGAGACGCTGTTATTGATAGTAATGTCTTACCATATTGTAGTATAGATCAAAAAAAAGAGAAGAAATCCGTTGGTGAACTTGAGCAAGAATTTCTTCAAGCACTCCAATCATTCTATTATGAGGGAAAGGCTATTATGTCGAATGAAGAATTTGATAATCTCAAGGAAGAACTCATGTGGGAAGGAAGCAGTGTTGTTATGCTAAGTTCGGATGAGCAAAAATTTCTTGAAGCTTCTATGGCTTATGTATCTGGAAAGCCAATTTTGAATGACAGAGAGTATGATGCGTTGAAATTGAGGCTAAAGAGGGAAGGGAGTGAAATTGTGGTCGAAGGTCCAAGGTGCAGCCTTCGAAGTAAAAAGGTTTACAGTGACCTGTCTGTTGACTATTTAAAGATGTTCTTGCTGAATGTCCCAGCCACTGTGGTTGCATTAGGATTGTTCTTCTTCCTTGATGATATAACTGGATTTGAGATCACTTACTTGCTAGAGCTGCCGGAGCCTTTTAGTTTCATTTTCACCTGGTTTGCTGCCGTTCCCCTCATTGTATATCTAGCTCTATCACTAACAAGAGCCATTATCAAAGATTTTGTGATTTTAAAGGGTCCCTGCCCAAACTGTGGACATGAAAATACCTCCTTCTTCGGGACTATACTGTCGATTTCAAGTGGTGGTTCCAACAACAAAGTCAAATGCTCCGACTGTGGAACTGAAATGGTGTACGATTCAAGTACAAGATTGATTACATTGCCAGAAGGAAGTAACGCCTAA 966 0.4099 MFTATKVAFTLTPPRLCSAPPTPFIPISSSFSRPHFTSRHLCLRRRLFLLSPKATADQGKVEEFEGDAVIDSNVLPYCSIDQKKEKKSVGELEQEFLQALQSFYYEGKAIMSNEEFDNLKEELMWEGSSVVMLSSDEQKFLEASMAYVSGKPILNDREYDALKLRLKREGSEIVVEGPRCSLRSKKVYSDLSVDYLKMFLLNVPATVVALGLFFFLDDITGFEITYLLELPEPFSFIFTWFAAVPLIVYLALSLTRAIIKDFVILKGPCPNCGHENTSFFGTILSISSGGSNNKVKCSDCGTEMVYDSSTRLITLPEGSNA 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g03117 321 PANTHER PGR5-LIKE PROTEIN 1B, CHLOROPLASTIC 30 311 IPR039987 GO:0009535|GO:0009773|GO:0016730
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g03117 Trre-Chr15 28380692 28384295 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g03117 - - gmx:100784314 521.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g03117 15 28380692 28384295 Trre15g03117 15 28380692 28384295 ECH
Trre15g03117 15 28380692 28384295 Trre9g00435 9 3147220 3149418 PCT