Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g03103 ATGGGATTCCCAACTAACTCACAAGATAAACCCCTCAAGTTCCTTATATACGGTCGCACCGGATGGATTGGAGGACTCTTAGGAACTCTCTGTCGCGCCCAAGGTATCCAATTCGAATACGGATCGGGTCGACTCGAAAACCGATCTTCTTTGGAATCTGACATAGCTGAGATTAAACCTACTCATGTCTTTAATGCTGCCGGTGTTACTGGTCGACCTAACGTTGACTGGTGTGAGACTCATAAAGTTGAAACTATTCGTGCTAATGTCGTTGGAACTCTTACTCTTGCTGATGTTTGCCGTGAACGTGGAATCATTGTTATTAATTTCGCTACTGGATGTATTTTTGAGTATGATTCTAATCATCCTCTTGGATCTGGTGTTGGTTTTAAGGAAGAAGATATTCCTAATTTCATTGGTTCATTTTACTCCAAGACTAAGGCTATGGTAGAGGATCTGCTGAGAAACTATGACAATGTATGTACTTTGAGAGTGAGGATGCCAATTTCATCTGATTTAACCAACCCTCGCAATTTCATCACTAAGATCACTCGATATGAGAAGGTTGTCGATATTCCAAACTCAATGACCATTTTAGATGAACTTCTTCCAATCTCAATAGAGATGGCAAAGAGAAACCTCACTGGAATCTGGAACTTCACAAATCCTGGAGTTGTTAGCCACAACGAAATCTTACAAATGTACAAAGACTATATCGATTCCAACTTTTCCTGGAAGAACTTCACTCTTGAGGAACAGGCTAAGGTGATCGTTGCTCCAAGAAGTAACAATGAACTTGACGCCGACAAATTGAAGAAAGAATTTCCAGAACTGTTGTCTATAAAGGAATCACTCATTAAGAATGTCTTCGAGCCTAATCAGAAGGTTAAAGCTTGA 897 0.4025 MGFPTNSQDKPLKFLIYGRTGWIGGLLGTLCRAQGIQFEYGSGRLENRSSLESDIAEIKPTHVFNAAGVTGRPNVDWCETHKVETIRANVVGTLTLADVCRERGIIVINFATGCIFEYDSNHPLGSGVGFKEEDIPNFIGSFYSKTKAMVEDLLRNYDNVCTLRVRMPISSDLTNPRNFITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILQMYKDYIDSNFSWKNFTLEEQAKVIVAPRSNNELDADKLKKEFPELLSIKESLIKNVFEPNQKVKA 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g03103 298 Gene3D - 4 298 - -
Trre15g03103 298 FunFam Bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase 4 298 - -
Trre15g03103 298 CDD dTDP_HR_like_SDR_e 13 285 - -
Trre15g03103 298 Pfam RmlD substrate binding domain 13 185 IPR029903 -
Trre15g03103 298 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 9 285 IPR036291 -
Trre15g03103 298 PANTHER DTDP-4-DEHYDRORHAMNOSE REDUCTASE 12 295 IPR005913 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g03103 Trre-Chr15 28235274 28236935 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g03103 K12451 - zju:107405251 545.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g03103 15 28235274 28236935 Trre15g03103 15 28235274 28236935 ECH