Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g03051 ATGAACTTTCAGAAACAAAAGTGCTTTAGGCACAACGTGATTATTTTAGTAGCAGCAACCTTATCATGGTTGTTATTGATTAACTCAAACATCGTTTTTGGATTTGCTCATGCTACTGGATTTGGTGAACAACCACTCTCCAAAATTGCAATTCACAAAGCAGTTGTTTCACTACATAGTGCTGCCTCAGTCACAGCCACTCCTTCTATTCTCGGCACTAAGGGTGAGGATACTCAATGGGTTACCATTGATGTTGATTTTCCTGATCCATCTGTAGATGATTGGGTTGGAGTTTTCTCTCCTGCAAATTTCAATTCATCAACCTGTCCACTTGTAAATGATCCAAAAGAACAGATTCCGTTCATATGTTCGGCTCCAATAAAGTACAAATTTGTCAATTACTCAAAGTCACACTATACCAAGACCGGAAAAGCTTCTTTGAAGTTCCAGTTAATCAATCAACGTGCGGATTTCTCCTTCGCACTATTTTCAGGCGGGCTATCAAATCCTAAACTTGTGGCGGTTTCCAATTTCATATCATTTGCCAATCCTAAAGCGCCGTTATATCCCCGACTTGCTCAAGGGAAGTCTTGGGATGTGATGACAGTCACATGGACAAGCGGATATGACATAAATGAAGCTACACCTTTTGTTGAATGGGTTCCTGAAGGAAAAACACCGGTGCAAAGCCCTGCTGGAACATTAACATTCGTTCGTAACAGCATGTGTGGTTCACCAGCACGAACTGTTGGTTGGCGTGATCCTGGTTTCATACACACAAGTTTTCTCAAAAATCTGTGGCCAAATTTAGTGTATACTTACCGATTAGGTCATCTTTTGTCTAATGGTTCTTACATTTGGAGCAAGAAATATTCATTCAAGTCATCGCCTTATCCTGGACAGGACTCACTGCAGCGTGTTGTCATATTTGGTGATATGGGCAAAGCTGAGCGTGATGGTTCAAACGAGTATAGTGACTACCAACCTGGGTCACTAAACACCACTGACCGGCTTATCGAGGATTTAAAAAATATAGACATTGTTTTCCACATAGGAGATATATCCTATGCAAATGGATACATCTCACAGTGGGATCAATTCACAGCTCAAGTAGAACCAATTGCATCGACAATACCATATATGATTGCCAGCGGTAATCATGAACGTGATTGGCCCAACACAGGATCCTTTTATGACACTACAGATTCAGGTGGCGAGTGTGGTGTTTTGGCTGAGACCATGTTTTATGTTCCAGCTGAAAACAGAGCAAAGTTTTGGTATGCGACGGATTATGGCATGTTCCGCTTCTGCATAGCTGACACCGAACACGATTGGCAAGAAGGATCTGAACAGTACAAATTCATTGAGCATTGTCTTGCAACAGTAGACAGACAAAAACAACCGTGGTTGATCTTTGCCGCGCATCGTGTGCTTGGATACTCCTCTTCCTCTGGGTATGCATCAGAAGGGTCATTTGAAGAGCCCATGGGAAGGGAAAGCTTGCAGAGACTTTGGCAGAAATATAAAGTAGATATTGCATTTTATGGCCATGTCCATCAATATGAAAGGACATGCCCCATTTATCAAAATCAATGTGTGAATACAGAAAGGTCTCATTATTCGGGCATTGTGAATGGAACGATTCATGTCGTTGTTGGAGGGGCAGGAAGCCACTTATCCGATTTCAGCCAAGTAACTCCAAAGTGGAGTCTTTACAGAGACTATGACTTTGGGTTTGGCAAGTTAACAGCATTCAATCATTCATCCCTCCTCTTTGAATACAAGAAAAGTAGAGATGGAAACGTCTACGACTCTTTTACCGTTTCAAGGAATTATAGAGATGTCTTGGCTTGTGTGCATGATGGTTGTGAAGCAACCACTTTAGCATCTTGA 1893 0.4179 MNFQKQKCFRHNVIILVAATLSWLLLINSNIVFGFAHATGFGEQPLSKIAIHKAVVSLHSAASVTATPSILGTKGEDTQWVTIDVDFPDPSVDDWVGVFSPANFNSSTCPLVNDPKEQIPFICSAPIKYKFVNYSKSHYTKTGKASLKFQLINQRADFSFALFSGGLSNPKLVAVSNFISFANPKAPLYPRLAQGKSWDVMTVTWTSGYDINEATPFVEWVPEGKTPVQSPAGTLTFVRNSMCGSPARTVGWRDPGFIHTSFLKNLWPNLVYTYRLGHLLSNGSYIWSKKYSFKSSPYPGQDSLQRVVIFGDMGKAERDGSNEYSDYQPGSLNTTDRLIEDLKNIDIVFHIGDISYANGYISQWDQFTAQVEPIASTIPYMIASGNHERDWPNTGSFYDTTDSGGECGVLAETMFYVPAENRAKFWYATDYGMFRFCIADTEHDWQEGSEQYKFIEHCLATVDRQKQPWLIFAAHRVLGYSSSSGYASEGSFEEPMGRESLQRLWQKYKVDIAFYGHVHQYERTCPIYQNQCVNTERSHYSGIVNGTIHVVVGGAGSHLSDFSQVTPKWSLYRDYDFGFGKLTAFNHSSLLFEYKKSRDGNVYDSFTVSRNYRDVLACVHDGCEATTLAS 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g03051 630 Pfam Iron/zinc purple acid phosphatase-like protein C 546 605 IPR025733 -
Trre15g03051 630 CDD MPP_PAPs 305 610 IPR041792 -
Trre15g03051 630 Pfam Calcineurin-like phosphoesterase 306 521 IPR004843 GO:0016787
Trre15g03051 630 Gene3D - 300 614 IPR029052 -
Trre15g03051 630 PANTHER PURPLE ACID PHOSPHATASE-RELATED 31 614 - -
Trre15g03051 630 SUPERFAMILY Metallo-dependent phosphatases 305 612 IPR029052 -
Trre15g03051 630 SUPERFAMILY Purple acid phosphatase, N-terminal domain 164 297 IPR008963 GO:0003993|GO:0046872
Trre15g03051 630 Gene3D - 186 299 - -
Trre15g03051 630 Pfam Fn3-like domain from Purple Acid Phosphatase 64 183 IPR040974 -
Trre15g03051 630 Pfam Purple acid Phosphatase, N-terminal domain 192 294 IPR015914 GO:0003993|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g03051 Trre-Chr15 27625701 27630142 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g03051 55 605 Miscellaneous Gene Families AT1G13900 30.343 2.76e-63 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g03051 K22390 - gmx:100814531 1107.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g03051 15 27625701 27630142 Trre15g03051 15 27625701 27630142 ECH