Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02973 ATGGAGGAAGCGACATTCGAGTCTGATCTAATCCGTTCCATCATGAAGCGCATTTGGACATTGCGAACCCTTGAGCGTGAAAATGTTGCAACCAACGATGCTTTGGATTCTGAGGGAGGAGCTGGATCGTCCAAGAAGAATCGGACAACTTCTGCTAATGCTAGTGCTTTGAAGCTTACTTGTGAACTTCTCCGTCTTTTTGTCACAGAGGCTATTCAGCGTGCTGCTGCAATTGCAGAGACTGAGGGTGATGATCAAATAGAAGCTACTCATTTGGAGAGTATTCTTCCACAGTTACTTTTAGATTTCTAA 312 0.4423 MEEATFESDLIRSIMKRIWTLRTLERENVATNDALDSEGGAGSSKKNRTTSANASALKLTCELLRLFVTEAIQRAAAIAETEGDDQIEATHLESILPQLLLDF 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02973 103 Gene3D - 62 103 - -
Trre15g02973 103 Pfam CENP-S associating Centromere protein X 46 103 IPR018552 GO:0006281|GO:0051382
Trre15g02973 103 PANTHER CENTROMERE PROTEIN X 3 103 IPR018552 GO:0006281|GO:0051382
Trre15g02973 103 MobiDBLite consensus disorder prediction 30 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02973 Trre-Chr15 26585113 26586964 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02973 K15360 - gmx:100810847 141.739
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g02973 15 26585113 26586964 Trre15g02973 15 26585113 26586964 ECH