Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02940 ATGCAAGACTCGATCGGTATACCTACTTGCTTTTCATCAGCTGAGAAGCTAAGTGATGATCATGGAGCTGGCGTGGCTCGTTCGGGGCAAAGTGTTTACATGTCAGTATACAGAACAAAAGTAGCTGATCATTGCCGTTTGATAACAATCACATGGTGCAAAAATCTGTTACTTCATGGGCTATCAATATCAGTAGAAGGTCCAGAAGGAGAATCTCAATATACCTGCAAGATTGAACTAAAACCATGGTATTTTTGGAGAAAACAAGGATCAAAGAAGTTTGTAGTAGATGGTAATAAAGCAGTTGATATTTTCTGGGACCTTAAAGGTGCTAAATTCAATGGAGAAACAGAACCAACTTCAGAATACTATGTAGCTGTTGTTTGTGATGAAGAGGTTGTTCTTCTTCTTGGTGATCTTAAAAAAGATGCTTATAGAAGAACAGGTTGTAGACCAGCACTTATTGATCCAATATTGGTTTCAAAAAAAGAACATATTTTTGGTAAGAAGAAATTCTCAACAAGAGCTAAGTTTCATGAGAAAGGTAAATGGCATGAGATTTCAATTGAATGCAAGAATAGAGGAAATGGAAATGGAAATGGTGGTGATAAGAATAATTCTGTTGTTGTTGGATCAGTTCAAGTTCAACCAGAAATGGAGATAAGAATTGATGGTCATTTGGTGATTCATGTGAAGCATTTACAATGGAAATTTAGAGGTAATGAATCAGTTCATCTAAGTAAAATGAGAATTGAAGTTTATTGGGATGTTCATGATTGGTTATTTAGTCCTGGTTTAAAACATGCTTTGTTTATTTTTAAGCCTATTTTGTCATCTACTATTTCTTCTTGTTCATCTTCTCCATTATCAATTCAAGCAAGGAGTGTTGAATCAGTTGAAGGATTTAGTGTAAGTGGTTCATCTGAATTTTGTTTGTTTCTTTATTGGGCTTGGAAAGTTGAATGA 966 0.3489 MQDSIGIPTCFSSAEKLSDDHGAGVARSGQSVYMSVYRTKVADHCRLITITWCKNLLLHGLSISVEGPEGESQYTCKIELKPWYFWRKQGSKKFVVDGNKAVDIFWDLKGAKFNGETEPTSEYYVAVVCDEEVVLLLGDLKKDAYRRTGCRPALIDPILVSKKEHIFGKKKFSTRAKFHEKGKWHEISIECKNRGNGNGNGGDKNNSVVVGSVQVQPEMEIRIDGHLVIHVKHLQWKFRGNESVHLSKMRIEVYWDVHDWLFSPGLKHALFIFKPILSSTISSCSSSPLSIQARSVESVEGFSVSGSSEFCLFLYWAWKVE 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02940 321 PANTHER EXPRESSED PROTEIN 7 318 IPR008586 -
Trre15g02940 321 Pfam Plant protein of unknown function (DUF868) 28 319 IPR008586 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02940 Trre-Chr15 25890137 25892806 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g02940 7 321 EF-hand Containing Proteins AT5G28150 35.849 3.77e-64 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02940 - - lja:Lj4g3v1415290.1 538.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g02940 15 25890137 25892806 Trre15g02940 15 25890137 25892806 ECH
Trre15g02940 15 25890137 25892806 Trre5g02764 5 22065754 22066852 PCT