Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02927 ATGGTTTCTGAATTCGTGATCAAGGCAAAATTTGGAGATAGTTTCAGGCGCTTCAGTGTCCCTGTCAATGAAAATAATCAAATGGAAATTAGCATGGTTGATTTCAGGGCTAAGATATGTTCTGCTTTCAATTTTACTGCGAATGCAAAATTCATTATGAGCTATGTTGATGAAGATGGCGACGTGGTGCATCTTGTGGATGATGGTGATTTGGATGATGTGATGAAACAACGAATGAAATTCTTGAAAATTGATATACATGGGAATGGAATCCTTCCGTTGGAATTCTCTCAATGGCGAAATAACATCACTAAATCTGCTAGTAAAATAGTATGGAATGAAGAATTAGTATGTTACGGATCTGCTTTTGTGGCTTGGGTAGGGTTGTGTTCAGCGATTATTTTCTCTAAACCAAAAGCTCAACCCCCAGCTATTATAAATCTTAGTAAAGGTTGCTCTAAACAGGAAGGTGGTGAAGGACTTTACTTGTTTCAGGCCTTGGAACGAGTTTATGGATGGATCTCCTCTCTCATGTCTTGA 540 0.3833 MVSEFVIKAKFGDSFRRFSVPVNENNQMEISMVDFRAKICSAFNFTANAKFIMSYVDEDGDVVHLVDDGDLDDVMKQRMKFLKIDIHGNGILPLEFSQWRNNITKSASKIVWNEELVCYGSAFVAWVGLCSAIIFSKPKAQPPAIINLSKGCSKQEGGEGLYLFQALERVYGWISSLMS 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02927 179 Gene3D - 2 88 - -
Trre15g02927 179 Pfam PB1 domain 5 77 IPR000270 GO:0005515
Trre15g02927 179 PANTHER OVARIAN CARCINOMA ANTIGEN CA125-RELATED 3 88 - -
Trre15g02927 179 SMART PB1_new 4 89 IPR000270 GO:0005515
Trre15g02927 179 SUPERFAMILY CAD & PB1 domains 4 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02927 Trre-Chr15 25667833 25670230 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02927 - K17987 mtr:25493717 171.014
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g02927 15 25667833 25670230 Trre15g02927 15 25667833 25670230 ECH