Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02918 ATGGCAAGCGCCACCTTACTTGCAATTCTCAAACCGTTGATTATTTTCATATTTGCAGCTTGGATTTCTCTTTGGCTTCTAAAGCCAACTCAAGTATGGACGAGAAAATGGAAACATGCAGAACAAAGTGCCAATAATACAATTTTTGGATACTATGGTCTAAACTTTGCTGTGTATACATTTCCAATAATTGGTATTGCTATTATTGGACTTCTTTTCTTGGATTTGAAAGCTGCATATCAAAGAAACAGAAGTTCAAGGAGTTCATCAAAAATCTTCTCAAATCCACTAGTGGTGAATAGTCTGATTGGAATCTTTTCAAGTATTGAAATACTGGTAGTTTTACTTTTTATAGTTTTCTTAGCATGGACTTATTATGCTCGTATTTCCAATGATTTCAAAAAGTTGATGCAAGACAAATCACTGAAATTGAACTTATGGCAACTTAAGTATCTCAGAATAGCAACAAGATTTGGTTTGCTAGCAGAAGCTTGTTTGGCTTTGCTTCTTCTTCCAATCTTAAGAGGGTTGTCTCTATTTCGCATATTCGGTATTCAATTTGAAGCTTCAGTTAGGTATCACACATGGATTGGAACTGCAATGATGCTTTTTGCTACAATACATGGTATCAGCACTTGGTTTATTTGGGGGGTCAGCCACCATATACAACATGAGATTTGGAAGTGGCAAAAGACAGGACGTATATACCTTGCTGGGGAGATTGCACTTGTTGTTGGGCTAATTATATTTGTTACTTCACTTCCCCAAATTAGAAGAAGAAAGTTTGAAATTTTCTACTACACACATCATTTGTATATAGTCTTTCTAGTATTTTTCTTGTTTCATGCTGGAGATAAGCACTTCTATATGGTATTCCCAGGAGTATTCCTTTTTAGCCTTGACAAACTGCTCCGAATAATTCAATCAAGCCCAAAAACCTGCATGGTTTCAGCTAGAATTTTTCCCTGTGATGCTGTGGAGCTAATCCTGCCTAAAGATCCAAGACTAAAGTATAACCCTACAAGTGTTATATATTTGAAGATACCAACTATATCTCATTTTCAATGGCATTCATTCAGTATAATATCTAGTTCCAAAAGTGATGAAAACATTATGTCTGTGATGATTAAATGTCAAGGGTGGTGGACAAATACTCTTTATGATTTGATACAAACTGAATTAAACAAAGGTGCTGATAAAAGGAAGGGTATACCTGTAGCAATTGAAGGACCTTATGGTCCTGCTGCATTAGACTTTTTAAAATATGACAGTGTACTTATGGTTGCTGGAGGGAGTGGAATAACTCCATTTCTGAGTATTTTGGCAGAAATCGATTCAACTAACAACAAAAATAAATTTCCTTCAAGGATAGAACTTGTGCATATCATTAAGAGGGCACAAGACATTTGTTTGTTACATTCGATCGCGCATATGCTAGTCAACCAAACAAGCGAAAAATTTCATTTGAAACTAAAATTGTTTGTAACGCAAGAAACACAACCAGGCATGGGAATTACAGAGCTGTTAAATGAGTTTGTGAAAGTAAAAACCCTGCAATTAGACAGTGTGAGCTCAAATTATTATGCAGCATATGGACCTGAAAGTCCAGTTTGGATGGCTGCTATTACAGGATGCTGTTCCATCACTTTCCTTGTTTTTCTAATATGTTTCAACCATATTATAATTCCATCTGAAAAGCATTCCAAATTGTCCAAAGAAAAGACTCCATCTTGGATTGTGGATTTAGTTCTGATAGCTGCTTTTGTCCTAGCTTTATCTTGCAGCACTTTGATAGCAATTGTGTTGAGATGGCGAAGGCTGAAGAAAGGGGTTCGGCCAACGTTGCAGACAGAAATTAAACCCTTTGATTTAAGTTCAGCTGAAACTAAGAATGCTCTTGAAGAGCATGAAGTTCATTTTGGAGGAAGGCCTGACTTTAAAGATATATTAGGCAAGTTCAAGAATGAAACGTGTGGATCTAATGTTGGAGTTTTGGTTTGTGGTCCTGAGAGCATGAAGGAATCAGTGGCGGCCGCGTGCCATCAAGAATCTGGGTGTTCAAAGTTAAGTGTAAAGACAACCAAACCATGCTTCACTTTCCACTCTCTCAACTTCACACTTTAG 2124 0.3677 MASATLLAILKPLIIFIFAAWISLWLLKPTQVWTRKWKHAEQSANNTIFGYYGLNFAVYTFPIIGIAIIGLLFLDLKAAYQRNRSSRSSSKIFSNPLVVNSLIGIFSSIEILVVLLFIVFLAWTYYARISNDFKKLMQDKSLKLNLWQLKYLRIATRFGLLAEACLALLLLPILRGLSLFRIFGIQFEASVRYHTWIGTAMMLFATIHGISTWFIWGVSHHIQHEIWKWQKTGRIYLAGEIALVVGLIIFVTSLPQIRRRKFEIFYYTHHLYIVFLVFFLFHAGDKHFYMVFPGVFLFSLDKLLRIIQSSPKTCMVSARIFPCDAVELILPKDPRLKYNPTSVIYLKIPTISHFQWHSFSIISSSKSDENIMSVMIKCQGWWTNTLYDLIQTELNKGADKRKGIPVAIEGPYGPAALDFLKYDSVLMVAGGSGITPFLSILAEIDSTNNKNKFPSRIELVHIIKRAQDICLLHSIAHMLVNQTSEKFHLKLKLFVTQETQPGMGITELLNEFVKVKTLQLDSVSSNYYAAYGPESPVWMAAITGCCSITFLVFLICFNHIIIPSEKHSKLSKEKTPSWIVDLVLIAAFVLALSCSTLIAIVLRWRRLKKGVRPTLQTEIKPFDLSSAETKNALEEHEVHFGGRPDFKDILGKFKNETCGSNVGVLVCGPESMKESVAAACHQESGCSKLSVKTTKPCFTFHSLNFTL 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02918 707 Pfam Ferric reductase like transmembrane component 159 279 IPR013130 -
Trre15g02918 707 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 299 418 IPR017927 GO:0016491
Trre15g02918 707 SFLD Ferric Reductase Domain 29 684 - -
Trre15g02918 707 SUPERFAMILY Riboflavin synthase domain-like 316 414 IPR017938 -
Trre15g02918 707 FunFam ferric reduction oxidase 8, mitochondrial 406 542 - -
Trre15g02918 707 Pfam Ferric reductase NAD binding domain 422 680 IPR013121 GO:0016491
Trre15g02918 707 PANTHER NADPH OXIDASE 17 705 - -
Trre15g02918 707 PRINTS Cytochrome B-245 heavy chain signature 237 260 IPR000778 GO:0016020|GO:0016491
Trre15g02918 707 PRINTS Cytochrome B-245 heavy chain signature 262 282 IPR000778 GO:0016020|GO:0016491
Trre15g02918 707 SFLD Ferric reductase subgroup (FRE) 8 684 - -
Trre15g02918 707 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 406 519 IPR039261 -
Trre15g02918 707 CDD NOX_Duox_like_FAD_NADP 316 497 - -
Trre15g02918 707 Gene3D - 602 705 IPR039261 -
Trre15g02918 707 Gene3D - 406 542 IPR039261 -
Trre15g02918 707 Pfam FAD-binding domain 316 415 IPR013112 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02918 Trre-Chr15 25526221 25529264 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g02918 179 707 Miscellaneous Gene Families AT5G50160 49.005 0.0 525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02918 K00521 - gmx:100816560 1061.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g02918 15 25526221 25529264 Trre15g02918 15 25526221 25529264 ECH