Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02902 ATGGAATGTTCAACCTCAAACTTCTTCGACACAGATATCACTCAACAAATCCACACCGTTGATTCTTTCGCTGCTTCCATCTCCAAATCCATCCAATCCCTCAAAACCACAGCGCAACAAACTTCTCAATATCAAGCTCAATTAGAACAAGTTAAAGGCAAATTGAAGGAAGTGGAGGATGAATTGGTTAAAGTACTCGCAGAAAAGACGCGCAAGGAGGCTACGAGAATGGCTTTGAAAGATGCTATTGCTTCTGCAAAGGCAAGAGTTGGAAATCTCAACACAATTATTCAAGAGCATCGAAACAGGAAGCAAGAGTATACATCATTTCTATCTCAGCAGTCTCTTGCTTTGGCTGCATCTGAGGGGAAGATAAATGATAGCATTGAGCATACAGATGAAACACATGAGGCTATCTCTTGGTATAACAGGATACTTGGTTTTCATGTCAAAGGGGGACGTGGGGTAAAGTTCACGTTCAAGAATATAAATTTGAAGAATCCAAACGAGGAGTACTCTTTTACTGTCTGCCATGATAACAATACTTACACGTTGTTAAGATGTGAACCTTCCGTCAATGGTATTGAAGAGTTGGTCCATGAATTAAACAAGACAGATGGTCTGTTTAAGTTTGTCAGAGTAATGAGGAAAAAATTTCAAGAAGCAGTAGCACAAGGGAGCATAGTTTCAACAAGAGTTGAACCTGAAGAATCTGCCTTTATCTCTTCATCTGCTCCTGGTACATCCGTTAGAAGTGATTCTACAACCACAGAAAATGAGCAACAAGTAGAACTCTCTGGCGGTAGTGCACAAATAAAGAAAAAAAACATTCGCAGAAGGAAAAGTTTGGCACTCTTATCTCCTGATTCTGCCTCATCTGTTCGTCAGTCTCCGCGTTTGAAGGTATGA 909 0.4037 MECSTSNFFDTDITQQIHTVDSFAASISKSIQSLKTTAQQTSQYQAQLEQVKGKLKEVEDELVKVLAEKTRKEATRMALKDAIASAKARVGNLNTIIQEHRNRKQEYTSFLSQQSLALAASEGKINDSIEHTDETHEAISWYNRILGFHVKGGRGVKFTFKNINLKNPNEEYSFTVCHDNNTYTLLRCEPSVNGIEELVHELNKTDGLFKFVRVMRKKFQEAVAQGSIVSTRVEPEESAFISSSAPGTSVRSDSTTTENEQQVELSGGSAQIKKKNIRRRKSLALLSPDSASSVRQSPRLKV 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02902 302 Coils Coil 83 103 - -
Trre15g02902 302 Gene3D Chromosome segregation protein Spc25 128 227 - -
Trre15g02902 302 PANTHER KINETOCHORE PROTEIN SPC25-RELATED 7 276 IPR045143 GO:0007059|GO:0031262
Trre15g02902 302 Pfam Chromosome segregation protein Spc25 152 220 IPR013255 GO:0007059|GO:0031262
Trre15g02902 302 Coils Coil 41 75 - -
Trre15g02902 302 MobiDBLite consensus disorder prediction 239 269 - -
Trre15g02902 302 MobiDBLite consensus disorder prediction 239 274 - -
Trre15g02902 302 SUPERFAMILY Myosin rod fragments 33 124 - -
Trre15g02902 302 FunFam Probable kinetochore protein spc25 127 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02902 Trre-Chr15 25302707 25306283 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02902 K11550 - gmx:100776032 369.777
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g02902 15 25302707 25306283 Trre15g02902 15 25302707 25306283 ECH