Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02894 ATGGCGCTGGTGCGTGTCTTCCCAACCACAACTCTTCCTCGTCTTGCTTCAACATTTTCCCTTAAAACAACCAAATTCATGATTCGGAGCTCTAATCTTCAACTCAAAACGCAACCCAATGACTCACGCAAGTTAGTTTTGGAAGTGAAAGAGAAGCTTGAAAAAGAACACCATAGTCTTCCTGTTGGTAGAAATGGTAGGGATGATGAAGATATGATTCTATGGTTTCTAAAAGATCGCAAATTTGATGTTCAAGAAGCTGTTTCTAAGTTGACTAAAGCCATTAAATGGCGTCAAGATTTCGAGGTGTCTAATTTGACTGAAGAATCTGTTAAAGATATTGCTCAAACTGGAAAAGCATATATACATGATTTTCTAGATATCAATGACAGGCCTGTGCTTGTGGTGGTTGCAGCAAAGCATTTTCCTAAAGCACATGATCCTGCAGATGATGAAAGGTTATGCGTTTTCTTAATTGAGAAGGCATTGAGTAAGCTACCAACTGGGAAAGAACAGATACTTGGAATATTTGATCTCAGAGGGTTCGGTACAGAAAATGCTGATCTTAAATACTTGACATTCTTGTTTAATGTGTTCTATTATTACTATCCAAAGCGATTGTCTCAAGTGCTATTTGTAGATGCTCCTTTTGTGTTTAAGCCAATTTGGCAGCTTACCAAGCCGATGTTAAAATCATATGCTTCTCTGGTAAGATTTTGCTCTGCAGAGACTGTCAGGAAGGAATATTTTACAGATGAAACTTTGCCACCAAACTTCAGAGTTTGA 786 0.3817 MALVRVFPTTTLPRLASTFSLKTTKFMIRSSNLQLKTQPNDSRKLVLEVKEKLEKEHHSLPVGRNGRDDEDMILWFLKDRKFDVQEAVSKLTKAIKWRQDFEVSNLTEESVKDIAQTGKAYIHDFLDINDRPVLVVVAAKHFPKAHDPADDERLCVFLIEKALSKLPTGKEQILGIFDLRGFGTENADLKYLTFLFNVFYYYYPKRLSQVLFVDAPFVFKPIWQLTKPMLKSYASLVRFCSAETVRKEYFTDETLPPNFRV 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02894 261 Gene3D - 17 259 IPR036865 -
Trre15g02894 261 SUPERFAMILY CRAL/TRIO domain 109 249 IPR036865 -
Trre15g02894 261 Pfam CRAL/TRIO domain 116 256 IPR001251 -
Trre15g02894 261 PANTHER SEC14P-LIKE PHOSPHATIDYLINOSITOL TRANSFER FAMILY PROTEIN 20 260 - -
Trre15g02894 261 SMART sec14_4 114 259 IPR001251 -
Trre15g02894 261 SUPERFAMILY CRAL/TRIO N-terminal domain 37 110 IPR036273 -
Trre15g02894 261 CDD SEC14 112 259 IPR001251 -
Trre15g02894 261 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 110 261 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02894 Trre-Chr15 25200520 25203315 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02894 - - vun:114175521 403.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g02894 15 25200520 25203315 Trre15g02894 15 25200520 25203315 ECH