Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02893 ATGAAGAAGGGAAGTGCATGGAATTGGAATGTAACATTAACCTCAATGTGTTTGGTTATGGCTATGATTTTTTGTAGTGCAACCGCTACAACCGAATCACCGCAATACACTGTCGTCCACACCGAATCCGATTTTGAGATCAGACTCTACAGACCCTCTGTCTGGATGTCCGCATCCGCCGTAGGCATCACCTCCTTCGAGAAAGCCACATGGAACGGTTTCCACAGATTATTCCAATTCATACAAGGCGCAAATCTCAATTTCTCTCGAATTCCAATGACTTCTCCAGTTGTAACGTGTATGGTTCCCGAATCCGGTCCTCTTGATTCCGAAGGCTATTACGTTGGTTTCTATTTGCCAGTAAAGTTTCAAGAGAATCCACCAGTTCCACTTCCAGAATTGAATATTAAGCCTTATAAATTTGATAGCCATTGTGTTGCTGTGAGAAAGTTCTCTGGATTTGCGAGGGATGAAAGGATTGTTGAAGAGGCGGAGAAGTTGGATAAGAGTTTGAGTAGATCTAAATGGAGTGATTCAAAGATTGAACAACGTGGTTACTCGATTGCACAGTATGATACTCCTTTTCGAAGTGCAAAAAGGAGAAATGAGGTTTGGGTTGTTATTCATGCTCCTAAATTAGGGTGTAATGCTGTTGGTGTTGCAGCATATTGA 672 0.4211 MKKGSAWNWNVTLTSMCLVMAMIFCSATATTESPQYTVVHTESDFEIRLYRPSVWMSASAVGITSFEKATWNGFHRLFQFIQGANLNFSRIPMTSPVVTCMVPESGPLDSEGYYVGFYLPVKFQENPPVPLPELNIKPYKFDSHCVAVRKFSGFARDERIVEEAEKLDKSLSRSKWSDSKIEQRGYSIAQYDTPFRSAKRRNEVWVVIHAPKLGCNAVGVAAY 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02893 223 Pfam SOUL heme-binding protein 32 206 IPR006917 -
Trre15g02893 223 Gene3D Regulatory factor, effector binding domain 30 213 IPR011256 -
Trre15g02893 223 FunFam Heme-binding protein 2 31 213 - -
Trre15g02893 223 SUPERFAMILY Probable bacterial effector-binding domain 20 208 IPR011256 -
Trre15g02893 223 PANTHER HEME-BINDING PROTEIN-RELATED 16 206 IPR006917 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02893 Trre-Chr15 25108285 25108956 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02893 - - tpra:123884225 329.331
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g02893 15 25108285 25108956 Trre15g02893 15 25108285 25108956 ECH