Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02887 ATGAAACACATATTTTCCTATTTGTTATGCCATTTTCTTCTGTTATTGGTCACACTTGATACTTCTTTTGTTGCAACACTTAGTAATGATGCTGATGATGCAACAGACACTAACTTGCTTCTCAGGATTAAATCAGAACTTGTTGATCCATTAGGAGCCATGAAAAACTGGTCTCCAACAACTCATGTATGCAAATGGAATGGAATAACATGTGATGTTAATCAGAAACATGTTATAGGCTTGAATCTTTCAGGTTCAGGAATAACAGGTTCCATTTCAGTTGAGTTAAGTAATCTCATTTCTCTTCAAACACTTGATTTGTCTTCAAATTCATTTAATGGTTCCATACCTTTAGAGCTAGGTAGCCTTCAAAATCTAAGAACACTCCAACTATACTCAAATTACCTCTCTGGTAACATTCCTGAAGAGATTGGTAATTTGAAGAAGTTGCAAGTTCTTAGAATAGGTGATAACTTTTTGACAGGTGGTATTCCACATAGCATCATCAACTTGAGTGAGTTGAATGTGTTAGGTTTAGGTTACTGTCTCTTAAATGGAACCATACCAGTTGGAATTGGTAATTTGAAAAATCTAGTTTCCCTTGATTTTCAAATGAATAGTCTTAGTGGCCTTATACCTGAAGAGATAAAAGGCTGTGAAATGCTTCAAAACTTTGCAGCATCAAATAACATGTTTGAAGGAGAGATTCCTTCCTCTATAGGTTCCCTTAAAGCATTGAGAATTCTTAATCTAGCTAATAACAGTCTTTCTGGTCCGATTCCTACATCGTTGAGTTATCTTTCTAACTTGACATACCTTAATTTGCTTGGAAACAAACTGAATGGTGAAATTCCACATGAGCTTAATAGTTTGATCCAATTGCAGAAGCTAGACTTGTCTAGAAACAACTTTTCTGGATCAATACGCCTCCTTAATACCGAACTGAAGAGTCTCAAAACTTTAGTTTTGTCTGATAATTTTTTGACAGGTAATATTCCAAGTAGTTTCTGTTTCAAAGGTTCAAAGCTTAATCAACTTTTCTTGGCTAATAATATTCTCTCTGGAAAATTTCCATTGGAGTTACTCAACTGCTCCTCAATACAACAGTTGGATCTTTCTGGTAATAGTTTTGAAGGTGAAATTCCATCTAGCATAGATAAACTGCAGAACATCACTGATCTTGTACTCAACAATAACACCTTTGTTGGATCACTGCCTCGTGAAATCGGAAATATTAGTACTTTGGAAGGTCTTTTCCTATTTGGTAATTTTTTAACAGGTGAAATTCCAGTGGAGATTGGAAAGCTGAAGAGATTGGACACTATTTATCTCTATGATAATCAAATGTCTGGATTCATACCAAGAGAGTTAACAAATTGCACAAGCTTAAGAGAAATTGATTTCTTTGGAAACCATTTTACAGGCCACATTCCTGAGACTATAGGGAAGCTGAAAAACTTGATTCTTCTTCATTTGAGGCAAAATGATTTGTCTGGTTCAATCCCTCCAAGTTTAGGGTACTGTAAAAGTCTTCAAATATTGGCCTTAGCAGATAATAAACTTTCAGGTCCTATCCCTTCTAATCTAGCTAATTCAGTAAACCTCCGCCGTCTCCGGCTCGGATACAATAACCTCACAGGAACTATTCCTTCTGAATTTGGTCAGCTTAATGATCTCAACTTTTTTGACTTATCATATAACAATTTAACAGGAGAAGTACCACCTCAACTCTCAAACTCGCGTAAAATAGAACACATTTTGCTGAGTAATAACAGATTGAGTGGCAAGATACCTAATTGGTTAGGAATCTTCCAAGAACTTGGTGAGTTGGATCTCTCATACAATAACTTCAGTGGCAAGTTACCTTCTGAAATTGGTAACTGTTCAAATTTACTCAAGCTTTCTCTCCATCACAACAATTTGTCTGGTGAAATTCCTCAAGAGATTGGAAATCTCACTTCTCTTAATGTCTTCAACATTCAAAGCAATAGTCTCAATGGCCATATTCCTTCAACCATTCAGAAATGCAAGAAGCTCTATGAGCTAAGGCTCTCACAAAATCTTCTGACAGGTACTATACCATTTGAGCTAGGAGAGCTTGATGAGTTACAAGTGATATTGGATTTGAGCAAAAATCTCTTCACTGGTGAGATTCCATCATCTTTAGGGTTTCCAAGAAGCTCTTTCTTGAACAATAACGGGTTATGCGGCTCGCCGTTGGTATCTTGCTCAGGATCAACATCACAGGGGAAAATGCAGCTATCAAACACACAAGTTGCAGTTATAATTGTGGCAATTGTGTTTACTTCAACTGTGATATGCTTAGTTATGTTGTATATAATGCTTAGAATTTGGTGCAATTGGAGAAAAGTTTCAGTATCAAATGATGCAGATGGAGGTAATATTGCAATGAAGAAAGAAGAAAGTAGATGGGTTTGTAATGATCAGAAGACAAGGAATGGAGAATATTGGAATATGAATTCATTTGGATTCATTCCTTCACCAGATAAGAATAATTCAGTAACAACAACTTGTTTCTTTAATATCAAAATGGAAGCAATGGAAAATGCAAATATATAA 2580 0.357 MKHIFSYLLCHFLLLLVTLDTSFVATLSNDADDATDTNLLLRIKSELVDPLGAMKNWSPTTHVCKWNGITCDVNQKHVIGLNLSGSGITGSISVELSNLISLQTLDLSSNSFNGSIPLELGSLQNLRTLQLYSNYLSGNIPEEIGNLKKLQVLRIGDNFLTGGIPHSIINLSELNVLGLGYCLLNGTIPVGIGNLKNLVSLDFQMNSLSGLIPEEIKGCEMLQNFAASNNMFEGEIPSSIGSLKALRILNLANNSLSGPIPTSLSYLSNLTYLNLLGNKLNGEIPHELNSLIQLQKLDLSRNNFSGSIRLLNTELKSLKTLVLSDNFLTGNIPSSFCFKGSKLNQLFLANNILSGKFPLELLNCSSIQQLDLSGNSFEGEIPSSIDKLQNITDLVLNNNTFVGSLPREIGNISTLEGLFLFGNFLTGEIPVEIGKLKRLDTIYLYDNQMSGFIPRELTNCTSLREIDFFGNHFTGHIPETIGKLKNLILLHLRQNDLSGSIPPSLGYCKSLQILALADNKLSGPIPSNLANSVNLRRLRLGYNNLTGTIPSEFGQLNDLNFFDLSYNNLTGEVPPQLSNSRKIEHILLSNNRLSGKIPNWLGIFQELGELDLSYNNFSGKLPSEIGNCSNLLKLSLHHNNLSGEIPQEIGNLTSLNVFNIQSNSLNGHIPSTIQKCKKLYELRLSQNLLTGTIPFELGELDELQVILDLSKNLFTGEIPSSLGFPRSSFLNNNGLCGSPLVSCSGSTSQGKMQLSNTQVAVIIVAIVFTSTVICLVMLYIMLRIWCNWRKVSVSNDADGGNIAMKKEESRWVCNDQKTRNGEYWNMNSFGFIPSPDKNNSVTTTCFFNIKMEAMENANI 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02887 859 SUPERFAMILY L domain-like 34 308 - -
Trre15g02887 859 SUPERFAMILY L domain-like 284 383 - -
Trre15g02887 859 Gene3D Ribonuclease Inhibitor 490 747 IPR032675 -
Trre15g02887 859 Pfam Leucine rich repeat N-terminal domain 34 72 IPR013210 -
Trre15g02887 859 Pfam Leucine Rich Repeat 317 337 IPR001611 GO:0005515
Trre15g02887 859 Pfam Leucine Rich Repeat 368 388 IPR001611 GO:0005515
Trre15g02887 859 PANTHER LEUCINE RICH REPEAT KINASE 2 453 810 - -
Trre15g02887 859 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 285 381 - -
Trre15g02887 859 FunFam Leucine-rich repeat receptor-like protein kinase TDR 473 745 - -
Trre15g02887 859 SUPERFAMILY RNI-like 381 722 - -
Trre15g02887 859 SMART LRR_typ_2 99 122 IPR003591 -
Trre15g02887 859 SMART LRR_typ_2 484 508 IPR003591 -
Trre15g02887 859 SMART LRR_typ_2 556 580 IPR003591 -
Trre15g02887 859 SMART LRR_typ_2 123 147 IPR003591 -
Trre15g02887 859 SMART LRR_typ_2 195 218 IPR003591 -
Trre15g02887 859 SMART LRR_typ_2 267 291 IPR003591 -
Trre15g02887 859 SMART LRR_typ_2 243 266 IPR003591 -
Trre15g02887 859 SMART LRR_typ_2 604 628 IPR003591 -
Trre15g02887 859 SMART LRR_typ_2 315 340 IPR003591 -
Trre15g02887 859 Pfam Leucine rich repeat 534 593 IPR001611 GO:0005515
Trre15g02887 859 Pfam Leucine rich repeat 245 304 IPR001611 GO:0005515
Trre15g02887 859 Gene3D Ribonuclease Inhibitor 33 185 IPR032675 -
Trre15g02887 859 FunFam Uncharacterized protein 190 284 - -
Trre15g02887 859 FunFam Uncharacterized protein 382 472 - -
Trre15g02887 859 Gene3D Ribonuclease Inhibitor 186 283 IPR032675 -
Trre15g02887 859 Gene3D Ribonuclease Inhibitor 284 380 IPR032675 -
Trre15g02887 859 Gene3D Ribonuclease Inhibitor 381 481 IPR032675 -
Trre15g02887 859 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 33 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02887 Trre-Chr15 25065841 25068780 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g02887 49 765 Receptor kinase-like Gene Family AT5G46330 36.693 2.48e-120 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02887 - - gmx:100779315 900.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g02887 15 25065841 25068780 Trre15g02887 15 25065841 25068780 ECH