Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02881 ATGGCCAACACAAACAACGCCGGCGCGGAAGCCCTACGCCGTCTGAAAGAAGTCGATCCACCGTCATTGCTCGTACCCAACCCAACCCTATCGGAAACTGCACGTGCTGCATCACAGTACCTATTCTCCTCCCTCAGACCTTTCTCCCAAAAATCTCCATTAGACCAACTCTTCGTCGACGGTTACGATGCTGAGCAGATTTGGCATCAAATTGATCTCCAATCGCAGCCTCTACTGTCCACTCTTCGCCGCCGGGTGAATCAGTTTGTCAAAAACCCTGAAGAGATTGCGCCGCTGAAGGTTCCTTCGGCTGTTGCAAAGAAGGTGGAGGCAAAGAATCAAGAGGAGTGGGAAGAGGAAAGTGATGATTTTGATGAGGAATTGGATGAAGATGACGAAGACGAGGATGATTTTGAAGGAGTAGAAAAGGAGAAGAAAAATGGAGGAAGTGAAGGAGAGGAAGATTCAGAAGAAGGAGAAGAAGAGGATGAAGAAGAAGGGAGTGAGGAGGAAGACGAGGAGGAGGGTGAAAAAGAGAAAGGTAAAGATGGTGGCATTGAAGATAAATTTTTGAAAATAAATGAATTGAATGAGTATTTAGAGAAGGAGGAAGATAATTATGAGAAAGCTGAGGAGGGAGATGATGATGATGAAGACAGTGAAGAAGATGATGAACTCGAACAGGCTGGTGATTTTGAGATGGATGAGGATGACGAGGATGATGATGAAGAAGATGAAGACGATGAAGAAGAAGAAGAGGGCATGGAAAATATAAGGTATGAAGATTTCTTTGGAGGTAAAAAAGAAAAGGGCTCAAAAAGAAAAGATCAGTTGATTGAGGAATCTGAAGATTCCGGTGATGAAGATGACATGGAATCCCACAAACAGAAGAAAACGACTGCCTCTACCTATGAAAAGCAGCTGGAAAAAATTCAATCAGAGATAGAGCTGATGGAAAAAGCTAATGTAGAGCCAAAAGATTGGACTATGCAGGGCGAGGTAACTGCTGCAAAGAGACCTGTTGGTAGTGCATTGGAAGTGAGTCTTGATTTTGAGCATAATGTGAGACCTGCTCCTGTAATCACTGAAGAGGTTACAGCTTCAATTGAGGAAATGATCCAGAAAAGGATTATTGAGGGGATTTTTAACGATGTTCAAAGGGTTTCTAGATTGCCATCGAGAGCGCCTCGGGAAGTTAAAGAATTGGATGATAATAAAAGCAAGCAGGGTCTTGCAGAAATGTATGAGCAAGAATATGTTCAGAAGATCGACCCCACATCTGCTCCATTGTCATTCAAAGATGAACTAAAAAATGAGGCAAGCATGCTGTTTAAGAGACTCTGTCTGAAGCTGGATGCCCTTTCTCATTTTAGCTTTGCTCCAAAACCTGTTATAGAGGACATGTCCTTCCAAACAAATGTACCTGCTCTGGCAATGGAAGAAATTGCTCCTGTGGCTGTTTCAGATGCTGCTATGCTGGCTCCTGAGGAGGTCTTTGATGGGAAGGGTGATGTTAAGGAAGAAGCAGAACTTACACAGGCAGAAAGGAAAAGGAGGAGGGCTAATAAGAAAAGAAAATTTAAAGCGGAGGCAGTAAAAAAGTCAGAAAAAAAGGCAAGGTTGGAAAAGAAGGACGACAATGCAATTTCTGGCCAAGTTAATGGCTAA 1668 0.4317 MANTNNAGAEALRRLKEVDPPSLLVPNPTLSETARAASQYLFSSLRPFSQKSPLDQLFVDGYDAEQIWHQIDLQSQPLLSTLRRRVNQFVKNPEEIAPLKVPSAVAKKVEAKNQEEWEEESDDFDEELDEDDEDEDDFEGVEKEKKNGGSEGEEDSEEGEEEDEEEGSEEEDEEEGEKEKGKDGGIEDKFLKINELNEYLEKEEDNYEKAEEGDDDDEDSEEDDELEQAGDFEMDEDDEDDDEEDEDDEEEEEGMENIRYEDFFGGKKEKGSKRKDQLIEESEDSGDEDDMESHKQKKTTASTYEKQLEKIQSEIELMEKANVEPKDWTMQGEVTAAKRPVGSALEVSLDFEHNVRPAPVITEEVTASIEEMIQKRIIEGIFNDVQRVSRLPSRAPREVKELDDNKSKQGLAEMYEQEYVQKIDPTSAPLSFKDELKNEASMLFKRLCLKLDALSHFSFAPKPVIEDMSFQTNVPALAMEEIAPVAVSDAAMLAPEEVFDGKGDVKEEAELTQAERKRRRANKKRKFKAEAVKKSEKKARLEKKDDNAISGQVNG 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02881 555 Coils Coil 294 324 - -
Trre15g02881 555 MobiDBLite consensus disorder prediction 502 517 - -
Trre15g02881 555 PIRSF snoRNP_Mpp10 24 553 IPR012173 GO:0005634|GO:0005732|GO:0006364|GO:0034457
Trre15g02881 555 Coils Coil 186 213 - -
Trre15g02881 555 PANTHER U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN MPP10 4 551 IPR012173 GO:0005634|GO:0005732|GO:0006364|GO:0034457
Trre15g02881 555 Pfam Mpp10 protein 50 535 IPR012173 GO:0005634|GO:0005732|GO:0006364|GO:0034457
Trre15g02881 555 MobiDBLite consensus disorder prediction 116 139 - -
Trre15g02881 555 MobiDBLite consensus disorder prediction 289 303 - -
Trre15g02881 555 MobiDBLite consensus disorder prediction 207 257 - -
Trre15g02881 555 MobiDBLite consensus disorder prediction 153 177 - -
Trre15g02881 555 MobiDBLite consensus disorder prediction 502 555 - -
Trre15g02881 555 MobiDBLite consensus disorder prediction 532 547 - -
Trre15g02881 555 MobiDBLite consensus disorder prediction 178 206 - -
Trre15g02881 555 Coils Coil 114 134 - -
Trre15g02881 555 MobiDBLite consensus disorder prediction 258 281 - -
Trre15g02881 555 Coils Coil 504 544 - -
Trre15g02881 555 MobiDBLite consensus disorder prediction 92 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02881 Trre-Chr15 25031999 25038297 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02881 K14559 - pvy:116135606 502.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g02881 15 25031999 25038297 Trre15g02881 15 25031999 25038297 ECH