Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02857 ATGGCAACGCAATCACCGCCTCCCGACGACGATAACCAAGGTGCTGAAATTATCCAACCGACCAACGTGGATCAGCAAAATGCCGGAGATGAGTCTGTTAAGCCCACTTCATCTACATCAGTCTTTGTGAACTCTGAACCATTACGGGAAGATCAGGTTCAGAATGCTGTGAAATTTCTATCACACCCAAAAGTTAAAGGTTCACCCGTTATGTACAGGCGGTCATTTTTGGAGAAGAAGGGCCTTACGAAGGAGGAGATTGATGAAGCCTTTCGGCGTGTGCCTGATTCAGCTCCAACTGTACAGACAGGTGGTGTAAATCAAGATGGGCAATTGAAATCATCATCAAATATTCAGCAACAACCCCAACAGCAAACTCTGCAGCCGGGTTTACCTGCTTCTACTGGTGTTAATACTTCACCAGGAACCTTATCACGAGCCAGATTCCACTGGTCCCATGCCCTTATTCTAGTCGGATTCCTGACTGCTTCAGGTGCTGGGACAGTTTTAATAATTAAGAATTCCCTTCTTCCTCGGTTAAAGTCTTGGATACGAAAGGTTGTCTTAGACGAAGATGATGAACAACTAAAGAAAACTAATAATAAACCAACTTTGGCTGAAGAAACTGCTCAAGCTGCAAAATCAGCAGCAGCTGCAGCTGCAGATGTGGCGAAAGCAAGCCAAGAAATGCTGGCTTCAAAGGGTGAAGAGAGGAAATACTTTGTGGAAGTTGTGAGTCTTTTAGATAAGCAAATACAAGAAATGAAGTTAATGACAAGTTCAATAAGAAGATTGGAAGATGTACGTTCTTATGATATCTCCGTCTCAGGGCAAGAAGATCTCCGAGTCAGTCAAACAAGTTCGAAGCGACTGGTTGCGAATGGCAAGGCGGACTATGACATGCGTTCAGTGAGATCGTTATCCCCGCCTGCATCTGTTGAACCATCAGGTCCTCCTCATCCAAAGTCATATATGGAGATAATGGCCATGGTCCAAAGAGGGGAGAAGCCTTCTAATATCAGAGAGATCAATGATTTACCCCCCAACCCTAGTCAACAGCCGTCAGATCCTCGCATATTGCCTAGATCCAAGCCTTGGGAGATTGGGCAGGTTCAAAACTCGTCTAGCCAAGTGTTTCAGCCTCAAGTAAATGGTGAAGAATCGTACACCAAGGTCCAAGAGACCACTCAATCAAATGGGGATGACCCATTGCCCTGGTGGCAGAAGAAAAATGTCAGAATCAGGGAGATTGATGAAATTGAGTATAATGTAGCACCTCCTAATGGTGCTGCATCTACTCAGCAGCCGCTACAACGTGTGTGGGTACCTCCTCAACCTCCACCGATAGCTATGGCGGGGGCTGCAGAAGCAATCAGGCGCCCAAAACAGGCTGTCCAAAAGGAACAGGTATCAGATAATCAATCAGTAGCTCAGTCTTCAGACATCTCTAATGGGGTGCATGGGATCCCGTCGGAATCTGAAGGTGCTGTAGAGGGAAGCAATGTCAGCTCTGGTGAGATACAAGTCTTACAACAAGATGATGAAATCAAATCTGCAGAGCAATGA 1566 0.4579 MATQSPPPDDDNQGAEIIQPTNVDQQNAGDESVKPTSSTSVFVNSEPLREDQVQNAVKFLSHPKVKGSPVMYRRSFLEKKGLTKEEIDEAFRRVPDSAPTVQTGGVNQDGQLKSSSNIQQQPQQQTLQPGLPASTGVNTSPGTLSRARFHWSHALILVGFLTASGAGTVLIIKNSLLPRLKSWIRKVVLDEDDEQLKKTNNKPTLAEETAQAAKSAAAAAADVAKASQEMLASKGEERKYFVEVVSLLDKQIQEMKLMTSSIRRLEDVRSYDISVSGQEDLRVSQTSSKRLVANGKADYDMRSVRSLSPPASVEPSGPPHPKSYMEIMAMVQRGEKPSNIREINDLPPNPSQQPSDPRILPRSKPWEIGQVQNSSSQVFQPQVNGEESYTKVQETTQSNGDDPLPWWQKKNVRIREIDEIEYNVAPPNGAASTQQPLQRVWVPPQPPPIAMAGAAEAIRRPKQAVQKEQVSDNQSVAQSSDISNGVHGIPSESEGAVEGSNVSSGEIQVLQQDDEIKSAEQ 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02857 521 MobiDBLite consensus disorder prediction 303 322 - -
Trre15g02857 521 MobiDBLite consensus disorder prediction 1 47 - -
Trre15g02857 521 MobiDBLite consensus disorder prediction 425 521 - -
Trre15g02857 521 Pfam Family of unknown function (DUF5572) 319 367 - -
Trre15g02857 521 FunFam Peroxisomal membrane protein PEX14 41 103 - -
Trre15g02857 521 MobiDBLite consensus disorder prediction 95 139 - -
Trre15g02857 521 MobiDBLite consensus disorder prediction 339 362 - -
Trre15g02857 521 Pfam Pex14 N-terminal domain 49 93 IPR006785 -
Trre15g02857 521 MobiDBLite consensus disorder prediction 100 139 - -
Trre15g02857 521 MobiDBLite consensus disorder prediction 496 511 - -
Trre15g02857 521 MobiDBLite consensus disorder prediction 467 487 - -
Trre15g02857 521 PANTHER PEROXISOMAL MEMBRANE PROTEIN PEX14 1 499 IPR025655 GO:0005515|GO:0005778|GO:0016560
Trre15g02857 521 Gene3D - 41 103 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02857 Trre-Chr15 24722170 24727639 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02857 K13343 - gmx:100784152 665.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g02857 15 24722170 24727639 Trre15g02857 15 24722170 24727639 ECH