Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02837 ATGCGATCCACTCATACTCCTACCTTCACCATCTTCGCCATCTTCTTCATCACAATCCTTCCTTATGTTATCATTGTTCAGGGACACACCTTCCCACCATTATCTTCCGACCTCGAAACCCTCCAGGGAAAATTAGGGTACAATTTCACGAGCTCACATCTTCTTATTCGCGCCATTACTCACGCTTCGTTCTCTCAAGAGAACAACAAAGCTTTCAGCATTGCGGGTGCTACTATCATAGAAACAACAGTTTCTTTCAATGTGCTTTCAAAAGACATTGATATTTCTGCCAAAGAGTTGAATCGTGTATTATCATTAAACTCCAATGTGGAATCTTCATGTGCTGTTGATGGAAAGCTTTTGAAATTGCATGAGGTTGTTCGTGTTTCGTCTAAGACGAATTCTTCTTCCAGTGCTGTGCTTTGTGGTGCTTTCAGATCAATCTTTGCTGCTATTGCTATTGATTCTGGTAAACTGGATACTGCTGGTAAGGCTTTCTCGAAAGTTAAGAGTGGTGAACTTGGGGTTTACGCGGCTATGTGA 543 0.418 MRSTHTPTFTIFAIFFITILPYVIIVQGHTFPPLSSDLETLQGKLGYNFTSSHLLIRAITHASFSQENNKAFSIAGATIIETTVSFNVLSKDIDISAKELNRVLSLNSNVESSCAVDGKLLKLHEVVRVSSKTNSSSSAVLCGAFRSIFAAIAIDSGKLDTAGKAFSKVKSGELGVYAAM 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02837 180 ProSiteProfiles Ribonuclease III family domain profile. 38 157 IPR000999 GO:0004525|GO:0006396
Trre15g02837 180 SUPERFAMILY RNase III domain-like 37 167 IPR036389 GO:0004525|GO:0006396
Trre15g02837 180 SMART riboneu5 53 179 IPR000999 GO:0004525|GO:0006396
Trre15g02837 180 Gene3D Ribonuclease III domain 36 174 IPR036389 GO:0004525|GO:0006396
Trre15g02837 180 Pfam Ribonuclease-III-like 53 159 IPR000999 GO:0004525|GO:0006396
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02837 Trre-Chr15 24510389 24511121 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02837 - - gmx:100527745 183.726
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g02837 15 24510389 24511121 Trre15g02837 15 24510389 24511121 ECH