Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02805 ATGGCATTACGCAAGCTTCTTGTGTTGGGGTTGTTACTTCTACTGTGCATCTCTAAGATTTCATCTGATCATGAGATAGAAATGGAAGAAGATGATGAACTGCAGTTACCTGATGATAAGCTGCTTATAGTCCGAGACGGAAACAGAAGGCTAATGTCTTATGTAGATTGTGGAGGATTATGTGGGTCGAGGTGCAGTGTGCATTCAAGGCCTAACTTATGCAAAAGGGCATGTGGGACTTGTTGTGTGAGGTGCAAATGTGTTCCACCGGGTACTTCTGGCAATAGGGAGTTTTGTGGGGCTTGTTACACTGATATGACCACTCATGGCAACAAGACCAAGTGCCCTTAG 351 0.4473 MALRKLLVLGLLLLLCISKISSDHEIEMEEDDELQLPDDKLLIVRDGNRRLMSYVDCGGLCGSRCSVHSRPNLCKRACGTCCVRCKCVPPGTSGNREFCGACYTDMTTHGNKTKCP 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02805 116 Pfam Gibberellin regulated protein 56 116 IPR003854 -
Trre15g02805 116 PANTHER EXTENSIN, PROLINE-RICH PROTEIN 2 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02805 Trre-Chr15 24028788 24029847 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02805 - - psat:127073889 189.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g02805 15 24028788 24029847 Trre15g02805 15 24028788 24029847 ECH