Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02803 ATGGAAAAGAAGCGGAAAAGGAATCAAAAAGCGGAGCGCGACGGCGATCAAAAGCCAAAGCCGGTTCAGTTAGGTCAAACCGATAATCAGAAGCAACCATTCCCTTCACACAGTGGACCCACCCCACAAGAATGCCTCGACATACGAGACACACTCTTATCCCTCCACGGCCTACCACCAGAACTCGCCAAATACCGCAAATCGCAACAAACCGACGACGATGGCACCGTCAATCCAGAACCACCGGAAACCGTTCTCGACGGTTTAGTCCGAACCATACTCTCACAGAACACTACAGAAACCAATTCTCAGAAGGCTTTCATTTCTCTCAAATCATTATTTCCTACATGGGAGCAGGTGCATGATGCTGAGACTAAGGATTTGGAGAATGCTATTCGTTGTGGTGGTTTAGCACCGACTAAAGCTTCGTGTATTAAGAATTTGTTGCGTTGTTTGTTAGAGAGAAAGGGGAAATTGTGTTTGGAGTATTTAAGAGATTTGTCTGTTGATCAAATTAAAGCTGAGTTGTCTGTTTTCAAAGGAATTGGTGCCAAAACAGTCTCTTGCGTGTTGCTGTTCAACCTTCAGCTAGATGATTTTCCCGTGGACACTCATATATATGAGATTGCGAAAACCATTGGTTGGGTACCTGCTTCTGCAGACAGAAACAAGACATACCTTCATCTAAACCAAAGGATCCCGGATGAACTTAAGTTTGACCTAAATTGCCTTCTGTATACTCATGGGAAGCTCTGCAGTAAATGTTCCAGTAAAAGGGGCAACAAGCAACAGAAGGAAAAAAAGCAAAATAAGAAATTCAATGATGACTCTTGTCCTTTATTGAATTATTATAAAGATTCAGTTTGA 867 0.4268 MEKKRKRNQKAERDGDQKPKPVQLGQTDNQKQPFPSHSGPTPQECLDIRDTLLSLHGLPPELAKYRKSQQTDDDGTVNPEPPETVLDGLVRTILSQNTTETNSQKAFISLKSLFPTWEQVHDAETKDLENAIRCGGLAPTKASCIKNLLRCLLERKGKLCLEYLRDLSVDQIKAELSVFKGIGAKTVSCVLLFNLQLDDFPVDTHIYEIAKTIGWVPASADRNKTYLHLNQRIPDELKFDLNCLLYTHGKLCSKCSSKRGNKQQKEKKQNKKFNDDSCPLLNYYKDSV 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02803 288 PANTHER - 8 285 - -
Trre15g02803 288 SMART endo3end 94 251 IPR003265 GO:0006284
Trre15g02803 288 MobiDBLite consensus disorder prediction 22 39 - -
Trre15g02803 288 SUPERFAMILY DNA-glycosylase 82 260 IPR011257 GO:0003824|GO:0006281
Trre15g02803 288 MobiDBLite consensus disorder prediction 1 48 - -
Trre15g02803 288 CDD ENDO3c 89 249 IPR003265 GO:0006284
Trre15g02803 288 Gene3D - 202 252 IPR023170 -
Trre15g02803 288 Pfam HhH-GPD superfamily base excision DNA repair protein 90 233 IPR003265 GO:0006284
Trre15g02803 288 MobiDBLite consensus disorder prediction 1 19 - -
Trre15g02803 288 Gene3D Hypothetical protein; domain 2 83 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02803 Trre-Chr15 23996728 23999479 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02803 K10773 - gmx:100802952 438.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g02803 15 23996728 23999479 Trre15g02803 15 23996728 23999479 ECH