Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02759 ATGAAATATTCACGCTTCCTACAATTTTCACGTCTCCGAAAAACCCTAATTCAAAACCCTAATTTCCCTTCTCCTCAAATTTCAAAACCCTACATCGCCACACCAAATCACCACCAATCAAATCCAAAATCTCAATGCAAATCCACCTCGATACGCAATTTCAACACCGCGTCGCAAGATTCCGAGAAAGTTTCAGCGATCGTCGACGAACTCATGGGATTAACGCTTTTGGAAGCAATGGACCTCGTTGAAGTGATGCGAGAGAAAAAAGGAATCAATGAGCTTCCGATTATGATGTTGATGGTTCCTGGAATGGGAATCAGGGGAATGCCGAGGGGTGTGGGTGGAACGAAAGGTGGTGCTGGAGAAAAAGCAGGGGAAGAGAAGAAGGTTGAGAAAACAGCGTTTGATGTGAAGCTTGATGGTTTTGATGCCGCGGCGAAGATTAAGATTATTAAAGAAGTTAGGACTTTTACAAGTTTGGGTTTGAAGGAAGCTAAGGATTTGGTGGAGAAAGCGCCTACTCTTTTGAAGAAAGGTGTGACGAAGGAAGAAGCGGAGAGTATTATTGCTAAGTTGAAGGAGGTTGGAGCAAAAGCTTCCATGGAATAA 612 0.4346 MKYSRFLQFSRLRKTLIQNPNFPSPQISKPYIATPNHHQSNPKSQCKSTSIRNFNTASQDSEKVSAIVDELMGLTLLEAMDLVEVMREKKGINELPIMMLMVPGMGIRGMPRGVGGTKGGAGEKAGEEKKVEKTAFDVKLDGFDAAAKIKIIKEVRTFTSLGLKEAKDLVEKAPTLLKKGVTKEEAESIIAKLKEVGAKASME 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02759 203 Hamap 50S ribosomal protein L7/L12 [rplL]. 61 203 IPR000206 GO:0003735|GO:0005840|GO:0006412
Trre15g02759 203 Pfam Ribosomal protein L7/L12 C-terminal domain 136 202 IPR013823 GO:0003735|GO:0006412
Trre15g02759 203 CDD Ribosomal_L7_L12 62 202 IPR000206 GO:0003735|GO:0005840|GO:0006412
Trre15g02759 203 PANTHER 39S RIBOSOMAL PROTEIN L12 42 203 IPR000206 GO:0003735|GO:0005840|GO:0006412
Trre15g02759 203 Gene3D - 130 202 IPR014719 -
Trre15g02759 203 Pfam Ribosomal protein L7/L12 dimerisation domain 63 101 IPR008932 GO:0003735|GO:0005840|GO:0006412
Trre15g02759 203 FunFam 50S ribosomal protein L7/L12 132 203 - -
Trre15g02759 203 SUPERFAMILY ClpS-like 132 202 IPR014719 -
Trre15g02759 203 SUPERFAMILY Ribosomal protein L7/12, oligomerisation (N-terminal) domain 63 137 IPR036235 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02759 Trre-Chr15 23489868 23490479 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02759 K02935 - gmx:100775592 226.483
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g02759 15 23489868 23490479 Trre15g02759 15 23489868 23490479 ECH