Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02750 ATGTTTATATGCGATGTGAATCACCAAAGAATCAAAACCAACGGAATATATATACACGTAGCAGAACAAGGAACAGGACCACTTGTTCTTTTGATTCATGGTTTTCCAGAAACATGGTATGCTTGGAGACATCAACTCAACTACTTATCACAACATGGTTATCATGTTGTTGCACCTGATTTAAGAGGATATGGTGACTCTGATTCTCCTCTAAATCCTAATTCCTATACTCTTCACCACATAGTTGGTGACCTTATTGGTCTTCTTGATCATTTTGGTCAACAACAGGCATATGTAGTTGGATCTGATTGGGGAGCAAACATTGGATGGCACCTAAGTCTATTTAGGCCTGATAGAGTGAAGGGATTTGTTGCTCTATGTGTTCCTTACTTTCCAAGGTCTCCAACAGATAAAACTGTTGAAACTATAAGAAAAATACATGGAGATGGAAGTCATGTTTGCCAATTCCAGGAACCAGGTCGCGCGGAGAGAGCCTTTGCTAGATATGATTTCTTAACAGTAATGAAAAAGTTTTTACTCGTTACATGGACACATTTTTTAACAGCTCCTTCTGGCATGGAGATTGTTGATTTCTTGCCAACTCCTTCGGTTTTGCCTTCATGGATAACTGAGGAAGAACTCATGGTCTTTGCAGACAAATTCGAAGAATCAGGTTTCACTGGTGCATTCAATTACTATCGCGCAATGGACTTAAACTGGGAGCTTCTAGCACCATGGCAAGGATCAAAGATAACAGTTCCAACTAAGTTTGTTGCTGGAGACAAAGATGTTGGTTTTCAAAATGGGGGTACAAAAGATTTTGTGGAAAGTGATATTTTCAAGAGTCTTGTTCCTAACCTTGAAGTGGTTATACTAGATGGCCATCACTATATACATCAAGAGAAAGCTCAACAAGTTTCAGAGGAAATCCTTTCCTTCATCCATAAGTTATCTTTAGAATAG 963 0.3884 MFICDVNHQRIKTNGIYIHVAEQGTGPLVLLIHGFPETWYAWRHQLNYLSQHGYHVVAPDLRGYGDSDSPLNPNSYTLHHIVGDLIGLLDHFGQQQAYVVGSDWGANIGWHLSLFRPDRVKGFVALCVPYFPRSPTDKTVETIRKIHGDGSHVCQFQEPGRAERAFARYDFLTVMKKFLLVTWTHFLTAPSGMEIVDFLPTPSVLPSWITEEELMVFADKFEESGFTGAFNYYRAMDLNWELLAPWQGSKITVPTKFVAGDKDVGFQNGGTKDFVESDIFKSLVPNLEVVILDGHHYIHQEKAQQVSEEILSFIHKLSLE 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02750 320 Gene3D alpha/beta hydrolase 4 318 IPR029058 -
Trre15g02750 320 PRINTS Alpha/beta hydrolase fold signature 99 112 IPR000073 -
Trre15g02750 320 PRINTS Alpha/beta hydrolase fold signature 113 126 IPR000073 -
Trre15g02750 320 PRINTS Alpha/beta hydrolase fold signature 53 68 IPR000073 -
Trre15g02750 320 Pfam alpha/beta hydrolase fold 27 130 IPR000073 -
Trre15g02750 320 PANTHER EPOXIDE HYDROLASE 12 315 - -
Trre15g02750 320 PRINTS Epoxide hydrolase signature 113 126 IPR000639 GO:0003824
Trre15g02750 320 PRINTS Epoxide hydrolase signature 291 313 IPR000639 GO:0003824
Trre15g02750 320 PRINTS Epoxide hydrolase signature 33 51 IPR000639 GO:0003824
Trre15g02750 320 PRINTS Epoxide hydrolase signature 253 269 IPR000639 GO:0003824
Trre15g02750 320 PRINTS Epoxide hydrolase signature 99 112 IPR000639 GO:0003824
Trre15g02750 320 PRINTS Epoxide hydrolase signature 53 68 IPR000639 GO:0003824
Trre15g02750 320 FunFam Epoxide hydrolase 4 317 - -
Trre15g02750 320 SUPERFAMILY alpha/beta-Hydrolases 4 316 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02750 Trre-Chr15 23432057 23434057 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g02750 6 318 Acyl Lipid Metabolism Gene Families AT3G51000 63.722 2.94e-152 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02750 - - gmx:100818894 578.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g02750 15 23432057 23434057 Trre15g02750 15 23432057 23434057 ECH