Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02738 ATGTCAGAGATTCCCAAACCAGAAGAAAACGGCGTTCTCATCCCTATCGTCGACGTCGATAGCGACAACGACGACTTCTCCGCTACAATGACCGACGTTCATTTACCAGTTCAGTCACAGCAAAACCTACCTGAGTCAAGTTCAGCTCCGTTCGTCTCTGAAAGCCGAAGTTTCTGGAAAGCTGGTGATTATGTTGTTGGTCCTTCTTCAAAACCATCTCATTCTCAAGGTCATTTGGATCATGCACGAGTTCATCCCAAGTTTCTTCATTCTAATGCAACTTCTCATAAGTGGGCTTTTGGAGCAATTGCTGAGCTAGTGGATAACGCCGTTGATGAGATTCAAAATGGCGCGACTTTTATTAAGGTTGACAAACTTGAGAACATGAAGGATAATTCACCAGTGCTATGTTTTCAAGATGATGGTGGTGGAATGGACCCCAACTCATTACGGAAGTGTATGAGCTTGGGTTATTCATCAAAGAAGTCGAAGACAACAATTGGACAGTATGGCAATGGATTCAAGACTAGTACTATGAGACTGGGTGCTGATGCTATTGTTTTTAGCCGGTCTACACGTTCGGGCCGGGCAACACAAAGTGTGGGTCTACTGTCTTATACCTTTTTGCGGAGAACCGGGCAAGATGATGTAATCATTCCAATGATAGATTTTGACATATCTGGCAACTGGGCTGAGCCAATTGCTTATGGCGGCTCACTGGATGATTGGTCAGCGAACTTGAAAACAATTCTTGATTGGTCTCCCTTCACATCAAAGGAGGATCTCATGCTTCAGTTTGAGGATATAGGATCACATGGAACCAAGATTTTAATATATAATTTGTGGCTGAATGATGAAGGAATATATGAATTGAGTTTTGATGATGATGACGAGGATATCATGCTGAGAGATGAGGCCAAGCCTGAAAGTGGGAAGAAATTGAACAAAAAAATTGTTCTGCTTCAGTCACATATTTCTTACCGCATCCGTTATTCTTTACGGGCATATGTATCACTTTTGTATCTCAGAAGATTTTCAAACTTCAAAATCATACTAAGGGGAAAACCTGTGGACCAATTTGACATTACAGATGAGTTAAGACATTCAGAAGTTGTTAGATACAAGCCCGCGAATGAGGCTACGGTGGAAACAACCATTGGATTTATAAAGGAGGCTCCTAATCTTAATGTTGCTGGATTTAATGTATACCACAAAAACCGCCTAATCAAGCCATTTTGGAAAGTAAACGCAGATGGTTCATCTAAAGGGAATGGTGTTGTTGGAGTTCTTGAAGCCAATTTTATAGAACCAGCACATGATAAGCAAGATTTTGAGAGATCACTCCTGTTCATACGTCTGGAAGGGAAGCTGAAACAAATGATATATGATTACTGGAAGGGTCACTGTCACTTAGTTGGATATCAGCCTATAAATTTTAGATCACAAATTGGGCAAAGCGAAGGCCACATTCAACAATCAACTGGGCAATTAACTAATTCACCGAATGAGCTTCTTGCGGATACACAAGATATTTTCCTAGCAGCTGGGCATCAACAAGTTGTGAATTTAGATCAGCCAGATGAGGATTTTCGTGCAACTGACAAGCAACGTTCGACTCATGAACAATGTGGTATATCAAGTGGAGCTCCAGCACCCATATCTGTTGATGACATCTGTGAAGAAAACATCAAACTTTTCACGAGGTGTGAGGAGTACAGGCAAAAGGAGACAGAGTTGAAAAAGACGGTCGATGACTTGGAGAAGGAGTTGAATGAAGTCCAAACCAAGTGTGCCTATGTTACTTCACTTTTAGAGGCCAAGAGAAAGCTGAAGAATGTATGCTGA 1845 0.4146 MSEIPKPEENGVLIPIVDVDSDNDDFSATMTDVHLPVQSQQNLPESSSAPFVSESRSFWKAGDYVVGPSSKPSHSQGHLDHARVHPKFLHSNATSHKWAFGAIAELVDNAVDEIQNGATFIKVDKLENMKDNSPVLCFQDDGGGMDPNSLRKCMSLGYSSKKSKTTIGQYGNGFKTSTMRLGADAIVFSRSTRSGRATQSVGLLSYTFLRRTGQDDVIIPMIDFDISGNWAEPIAYGGSLDDWSANLKTILDWSPFTSKEDLMLQFEDIGSHGTKILIYNLWLNDEGIYELSFDDDDEDIMLRDEAKPESGKKLNKKIVLLQSHISYRIRYSLRAYVSLLYLRRFSNFKIILRGKPVDQFDITDELRHSEVVRYKPANEATVETTIGFIKEAPNLNVAGFNVYHKNRLIKPFWKVNADGSSKGNGVVGVLEANFIEPAHDKQDFERSLLFIRLEGKLKQMIYDYWKGHCHLVGYQPINFRSQIGQSEGHIQQSTGQLTNSPNELLADTQDIFLAAGHQQVVNLDQPDEDFRATDKQRSTHEQCGISSGAPAPISVDDICEENIKLFTRCEEYRQKETELKKTVDDLEKELNEVQTKCAYVTSLLEAKRKLKNVC 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02738 614 Coils Coil 569 596 - -
Trre15g02738 614 Gene3D - 86 221 IPR036890 -
Trre15g02738 614 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 99 281 IPR036890 -
Trre15g02738 614 FunFam MORC family CW-type zinc finger protein 4 85 287 - -
Trre15g02738 614 Pfam Morc6 ribosomal protein S5 domain 2-like 331 465 IPR041006 -
Trre15g02738 614 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 101 193 - -
Trre15g02738 614 PANTHER ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. 44 609 IPR045261 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02738 Trre-Chr15 23240158 23262214 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02738 - - gmx:100781431 845.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g02738 15 23240158 23262214 Trre15g02738 15 23240158 23262214 ECH