Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02727 ATGGACCGTCCTCCGCCGTGGACTCCCGACGACGATTTTCTCCTCAAAAACGCCATTGAGGATGGAGCTTCTCTGGAATCGTTGGCCAGAGGAGTTGTTGCTTTCTCCCGGAGGTACACCCTTGCGGAATTGAGAGAACGCTGGGGCTCTCTTCTCTATGACTCTGATGTTTCAGGTGAAGCTTCTGCTGCGATGACCAAGTTGGAGATCGCCAAGGCTAACGGTAACGAAATCAAAGAAACGGCCGCTGCAGACGTTGCTGCTCCGAAGAGAAAAATTCAAAGCATTCGCAGGATGTACTACAGCATGCGGAAAAAAATTCGTACAGAGGTTTTTTTTAATACTTTTGATATGGCTTTACATGATGAGATGTGTATTGAAAATAATATCACTGAAAAAGAAATTGGGGGGGCTGGGTTTGATAATATTAATGATAGTTTAAATAAGGATGTCAATAATAAATCTCATGTCAATAGTTTGTTTAATTATGGGAATCAATTGGGGTTAGTGGGATCTGGGGTGGGGTCCTCTCATTCAATGAGTGAAGATCCACTGTGGAAGACAATTGAGGATGTCTCTGCTCCTAACATGCCGGTTCATGTTAGTCTTGAAAATGAAAATGGAGGTTCTGAGTCGAAAGAGACGATTCCTCGTGGTTCTGATGCTCTCTTGAACTCTGCGAATGGAGACGAGCTTATGTTTATGAACATAGATGAGAAAGGTGAAACTGCCGCTAATAAGAAGTCTGATGATGATGTTGATTCGACTCCTCGTGGCATTCAAGGCAATTATATGTCTGGTGTTGGTGAGTCTCAGAAGTTGGTTGCAGAAACACAACTTGCTACGGCAAATGGTCCGTCCGCTGAGTTAGAAGATGTTGCCATCTCGACTGGCAGTAGTCAAGGTGATTCGGGTTTTGTTTTTGATTGTGGAAATGAAGTCCAATCTTCTGGTGCAGCGCAAAGTTCCCACCCTAAGCCTGCAAGTGAATTTAGGTTCTGTTCATTGAACACTGAGGACCCTAATGTCCCTTCTGATGGCGCTGAGGATGTAAACGAATCCACTGCACTTCCTAATTTATTGAGCGCATCCGTTGTAGTAGTTCCTAGTTCTGTGAATATATCCTCTGTAGTAGGTCCTAGTTCTGCGAACGTATCCTCTGTAGTAGTTCCTAATTCCACGACTCCGAAATCCATATCAATTGTTAAAGAGGTGGGTTATCCAGATTCCTCTATCAGTAATCAAAGAAGAAATGAACGAGATAGAAGCTTGAAGCGAAAAGACATTCCTTCAAACTCCTTTGTAACTTCTCAGTCAGTTCGACCAGGATTAGTGCCTAATATAGTTTCAAGGAAGGAAAACCCTGCTGCACCGAAAACTGAAAATCCTGCAAAGAACACAGTTTCTAGACAGAGTAATGTCGTTGTCAACCCAACTCAAAGCAGATTAGTCCATGCAAATGCAAAGCATGCCTCATATGGACTTCCGGCACAAGAGGTAATTATTGCTCTGCCTTCACCTGTTGATACACAACCAAACATAGAGGAACATAAGAATTTACCTGATATGGAAGCAAAGTTAATATGCATCGATCAGGAAAGAGGTGACAATGACGACGAAGATAGCGATGAAGATGAGAACGATGATGAGCATGAAATTCCTTACTTTTCTGATGTTGAGGGAATGATTCTTGAAATGGACTTGGGTCCAGCTGATCAAGATACAAATGCAAGTACCGAAGTCATGAGATTTCAATGTGAAGAAACTAAGAGGACCATCATGAGATTGGAGCAATGTGCCCAGTCCTTTGTGCGAAGAAATATTGCATCTCGAGGTGCACTTGCAGTATTATATGGGCGCAATATGAAGAAATATATTTATAAACCTGAGGTGATAATTGGCAGATCAACAGAAGAAGCAGCTGTTGATATTGACTTGACTAGAGCAGGGGAATATACTCACAACATCTCTAGAAGACAAGCTTCGATAAGGCTGGATGCAGATGGTTCTTTCATCCTCAAAAATCTTGGCAAGAAATCTATATTCTTGAATGGGAAAGAAATTGCTAAAGGACAGCAGCGGGGTCTGAGTGATGGTAGTTTTATCGAGATTAGGGACCTGTCATTCATCTTTGATTTCAATAAGGAATGTGTGGAGAGGTTTATAGAAGATGAGGATGAGGACGAACGCAGAGCGATACAAGGATGA 2208 0.4239 MDRPPPWTPDDDFLLKNAIEDGASLESLARGVVAFSRRYTLAELRERWGSLLYDSDVSGEASAAMTKLEIAKANGNEIKETAAADVAAPKRKIQSIRRMYYSMRKKIRTEVFFNTFDMALHDEMCIENNITEKEIGGAGFDNINDSLNKDVNNKSHVNSLFNYGNQLGLVGSGVGSSHSMSEDPLWKTIEDVSAPNMPVHVSLENENGGSESKETIPRGSDALLNSANGDELMFMNIDEKGETAANKKSDDDVDSTPRGIQGNYMSGVGESQKLVAETQLATANGPSAELEDVAISTGSSQGDSGFVFDCGNEVQSSGAAQSSHPKPASEFRFCSLNTEDPNVPSDGAEDVNESTALPNLLSASVVVVPSSVNISSVVGPSSANVSSVVVPNSTTPKSISIVKEVGYPDSSISNQRRNERDRSLKRKDIPSNSFVTSQSVRPGLVPNIVSRKENPAAPKTENPAKNTVSRQSNVVVNPTQSRLVHANAKHASYGLPAQEVIIALPSPVDTQPNIEEHKNLPDMEAKLICIDQERGDNDDEDSDEDENDDEHEIPYFSDVEGMILEMDLGPADQDTNASTEVMRFQCEETKRTIMRLEQCAQSFVRRNIASRGALAVLYGRNMKKYIYKPEVIIGRSTEEAAVDIDLTRAGEYTHNISRRQASIRLDADGSFILKNLGKKSIFLNGKEIAKGQQRGLSDGSFIEIRDLSFIFDFNKECVERFIEDEDEDERRAIQG 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02727 735 MobiDBLite consensus disorder prediction 409 472 - -
Trre15g02727 735 PANTHER MICROSPHERULE PROTEIN 1 6 726 IPR037912 GO:0002151|GO:0031011|GO:0071339
Trre15g02727 735 MobiDBLite consensus disorder prediction 429 444 - -
Trre15g02727 735 Pfam N-terminal region of micro-spherule protein 7 69 IPR025999 -
Trre15g02727 735 Gene3D - 570 724 - -
Trre15g02727 735 SMART FHA_2 630 688 IPR000253 GO:0005515
Trre15g02727 735 MobiDBLite consensus disorder prediction 414 428 - -
Trre15g02727 735 SUPERFAMILY SMAD/FHA domain 616 713 IPR008984 GO:0005515
Trre15g02727 735 ProSiteProfiles Forkhead-associated (FHA) domain profile. 631 688 IPR000253 GO:0005515
Trre15g02727 735 Pfam FHA domain 631 704 IPR000253 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02727 Trre-Chr15 23095208 23100270 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02727 - - mtr:11408169 877.856
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g02727 15 23095208 23100270 Trre15g02727 15 23095208 23100270 ECH