Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02720 ATGGCTACGGCGTCGTCGTCAGCGACGACAACTCCGTCGTTTCTATCACCGACGCAGCGGTACGCTGCCGCAGCACTGTTCGGACTATCCCTTCACGAATCCCAAGTTAATCAAACCCGAATTCTCCCCTTACCCGCTTCGGATGATTCCATCTCCAACACCAATCGAATCAGTAGTAGCAGCTCTAGCAGTAGTGATTCTGTTTCCGATGATCCCGATCTTTGGGTTCACCACCACTCCGGTTTACTCCGCCCCGTTTTCAAGTTTCTAGATATTGATTCTTCTGCATGGTATGGATTAGAGGAAACTTCTGGTTCTGCTGCTGCTACACATCATGTTGGACCCTTTATGAGACTGCTTTCACAAGAATCTGATGATGCTTCTGCTGAATCTGCTCAAAGGCTAGACAAAGAACTTGCATTGTCAAAAGCTGTTGATGCTATAGTACTTGGCATGGAAAAGAATTTGCAGCCTTCTAAGTCAAAAAGAGAGAGGCTTCATGAATACGAGCAACGGTGTCGCGAAAAATTTTCGGCTCCTGATGTTCAATCTAATTCTGAAAAGGTTGATGTTGATATAAACTCGGAAAACCATAATGAGACTGATGTTACTCCTTTAATCAACTTTGAAGAAACGCACGAGGGACCTGATAATAGTAAAATTGATGAGACACCTGATAATAGTAAAGTTGATGAGAGACCAATTGAAGAAGTGACGATGCTTAGTGATCAGAGGAAAGTGACGGTTCTCTATGAACTTCTATCTGCCTGTCTTTCGGATTTGCGTGATGATGACAAAGAATGTAAGCGGAAGAGAAGGGGTTATGATGCTCGCCATCGTGTGGCTTTGAGGTTGCTGGCAACATGGCTTGATGTCAAGTGGACAAAAATGGAGGCCATTGAGACCATGGTTACTTGTTCTGCAATGGCTATAATTAAAGAGCAAGAATTAAAGAAAGAAGAAGATCAAGCAAAAGGAGGCAAGTGGGCGAAATTGAAGCGTGGTGGTATTATTGGCGCTGCTGCAATTACTGGGGGAACCTTGTTGGCTATTACTGGTGGGTTAGCTGCACCAGCAATTGCTGCAGGATTTGGAGCACTAGCTCCAACTTTGGGTACTCTGATCCCTGTAATTGGAGCCAGTGGATTTGCTGCAGCTGCCGGTGCTGCAGGAACTGTTGCTGGTTCTGTTGCTGTTGCTGCATCATTTGGCGCTGCTGGTGCTGGACTTACGGGAAGCAAAATGGCTAGGAGAGTAGCTGGCGTTGATGAGTTTGATTTCATAACTATTGGAGAAAACCATAACCAAGGCAGGCTAGGGGTTGAGATCTTGATCTCTGGGTTTGTCTTTGAGAAGGAAGATTTTATAAGGCCATGGGAAGGACTGAATGACAACTTGGATAGGTATTCACTTCAATGGGAGTCTAAAAATCTGATTGCCGTGAGCACTGCGATTCAGGATTGGCTTACTTCAAGACTTGCAATGCAGCTGATGAAGCAAGGGGCAATGATGACCGTTTTGAGCACACTTGTAACTGCTCTGGCTTGGCCAGCTGCATTACTTGCAGCAACTGATTTCATTGACAGTAAATGGACAATAGCTATTAACAGATCAAACAAAGCAGGAAAGTTGCTTGCTGAAGCATTGTTGAAAGGATTGCAGGGAAATAGGCCCGTGACACTTGTAGGTTACTCTCTTGGGGCAAGAGTTATTTTTAAGTGCCTACAGTATTTGGCTAAAACAGAAAATGGAGCTGAACTAGTAGAAAGAGTTGTACTTCTTGGAGCACCCATCTCAATCAGGGACGAGAACTGGGAAGCTGCTAGAAAGATGGTAGCAGGAAGGTTTGTAAATGCTTATTCAAGGAGTGACTGGATGCTTGGAGTTGCCTTTCGAGCCAGTCTACTCACAAAAGGATTAGCCGGAATCGAACCAGTTGATATTTCTGGGATCCAAAATGTCGATGTCACAGATCACATTGAAGGCCATTCATCTTATCTGTGGGCTACACAACAGATCTTAGACCAACTTCAGTTAGATACATGTTTTCCAGTTTATAATGGCGTTTCTTGCATACAGTCAGGAGCAGAGCCAGAAATTTCGATGAAGGGAGGAGGGCAAGACCAAAAAGTATAG 2136 0.4457 MATASSSATTTPSFLSPTQRYAAAALFGLSLHESQVNQTRILPLPASDDSISNTNRISSSSSSSSDSVSDDPDLWVHHHSGLLRPVFKFLDIDSSAWYGLEETSGSAAATHHVGPFMRLLSQESDDASAESAQRLDKELALSKAVDAIVLGMEKNLQPSKSKRERLHEYEQRCREKFSAPDVQSNSEKVDVDINSENHNETDVTPLINFEETHEGPDNSKIDETPDNSKVDERPIEEVTMLSDQRKVTVLYELLSACLSDLRDDDKECKRKRRGYDARHRVALRLLATWLDVKWTKMEAIETMVTCSAMAIIKEQELKKEEDQAKGGKWAKLKRGGIIGAAAITGGTLLAITGGLAAPAIAAGFGALAPTLGTLIPVIGASGFAAAAGAAGTVAGSVAVAASFGAAGAGLTGSKMARRVAGVDEFDFITIGENHNQGRLGVEILISGFVFEKEDFIRPWEGLNDNLDRYSLQWESKNLIAVSTAIQDWLTSRLAMQLMKQGAMMTVLSTLVTALAWPAALLAATDFIDSKWTIAINRSNKAGKLLAEALLKGLQGNRPVTLVGYSLGARVIFKCLQYLAKTENGAELVERVVLLGAPISIRDENWEAARKMVAGRFVNAYSRSDWMLGVAFRASLLTKGLAGIEPVDISGIQNVDVTDHIEGHSSYLWATQQILDQLQLDTCFPVYNGVSCIQSGAEPEISMKGGGQDQKV 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02720 711 Gene3D alpha/beta hydrolase 483 679 IPR029058 -
Trre15g02720 711 PANTHER TRANSMEMBRANE AND COILED-COIL DOMAIN-CONTAINING PROTEIN 4 TMCO4 3 686 IPR007941 -
Trre15g02720 711 MobiDBLite consensus disorder prediction 210 229 - -
Trre15g02720 711 MobiDBLite consensus disorder prediction 44 71 - -
Trre15g02720 711 MobiDBLite consensus disorder prediction 44 70 - -
Trre15g02720 711 SUPERFAMILY alpha/beta-Hydrolases 547 629 IPR029058 -
Trre15g02720 711 MobiDBLite consensus disorder prediction 213 229 - -
Trre15g02720 711 Pfam Protein of unknown function (DUF726) 331 679 IPR007941 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02720 Trre-Chr15 23048011 23055809 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02720 - - tpra:123921716 1137.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g02720 15 23048011 23055809 Trre15g02720 15 23048011 23055809 ECH