Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02633 ATGGCTAGATACGATCGAGCAATTACGGTTTTCTCCCCGGATGGCCATCTTTTCCAGGTCGAGTACGCTCTTGAAGCTGTTCGTAAAGGTAACGCCGCCGTTGGTGTTCGCGGTACCGACAACGTTGTTCTCGGCGTCGAGAAGAAGTCCGCCGCCAAACTCCAAGACTCTAGATCAGTGAGGAAGATTGTTAATCTCGACAATCACATTGCTCTTGCTTGTGCTGGACTGAAAGCTGATGCACGTGTTCTTATAAACAGGGCTCGAGTTGAATGTCAAAGTCACAGGCTTACCGTCGAAGATCCTTGTACCGTGGAGTATATTACTCGGTACATAGCAGGTCTTCAACAAAAGTACACCCAGAGTGGTGGTGTGCGGCCCTTTGGCCTTTCCACCTTGATAGTCGGCTTTGATCCTTACACCGGGTCACCATCTCTGTACCAAACCGACCCTTCTGGCACATTTTCAGCTTGGAAAGCCAATGCTACGGGAAGAAACTCAAATTCAATCCGTGAGTTTTTAGAAAAGAACTATAAAGACACCTCTGGGCAAGAAACTGTCAAATTGGCTATCCGAGCATTGCTTGAGGTTGTGGAGAGTGGAGGCAAGAACATTGAAGTTGCCGTGATGACCAAGGACGCTGGACTGCGTCAACTGGAGGAAGGTGAAATTGACACCATTGTTGCTGAGATTGAAGCAGAGAAAGCAGCTGCTGAGGCTGCAAAGAAAGCTCCTCCTAAGGATACATGA 750 0.484 MARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDNVVLGVEKKSAAKLQDSRSVRKIVNLDNHIALACAGLKADARVLINRARVECQSHRLTVEDPCTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGSPSLYQTDPSGTFSAWKANATGRNSNSIREFLEKNYKDTSGQETVKLAIRALLEVVESGGKNIEVAVMTKDAGLRQLEEGEIDTIVAEIEAEKAAAEAAKKAPPKDT 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02633 249 Pfam Proteasome subunit A N-terminal signature 4 26 IPR000426 GO:0006511|GO:0019773
Trre15g02633 249 ProSitePatterns Proteasome alpha-type subunits signature. 4 26 IPR000426 GO:0006511|GO:0019773
Trre15g02633 249 CDD proteasome_alpha_type_7 4 210 - -
Trre15g02633 249 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 3 246 IPR029055 -
Trre15g02633 249 ProSiteProfiles Proteasome alpha-type subunit profile. 19 228 IPR023332 -
Trre15g02633 249 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 3 234 IPR029055 -
Trre15g02633 249 PANTHER PROTEASOME SUBUNIT ALPHA/BETA 8 233 - -
Trre15g02633 249 Pfam Proteasome subunit 27 210 IPR001353 GO:0005839|GO:0051603
Trre15g02633 249 SMART Proteasome_A_N_2 4 26 IPR000426 GO:0006511|GO:0019773
Trre15g02633 249 FunFam Proteasome subunit alpha type-4 1 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02633 Trre-Chr15 22199114 22201281 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02633 K02731 - gmx:100808731 432.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g02633 15 22199114 22201281 Trre15g02633 15 22199114 22201281 ECH