Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02543 ATGGCAAACAAGTACAATGTTAGATCAATTAGTTTGCCATCTAGATCTCATCCTAGCACAATTAGAGTTGATGAAGAATTGAACAAGCTCAAGACTTGGGAAGGAACATCTACATCCACATCAAGGTCCATTCATAATGGTCTTTCCTTGCTTGAAGATTTGTATATTTCATTGGATGATCTTTTCAACATGACATCAACCAAACAAGTGATTTCTCACCATAGAGGTGAGAAATGCATTGAAGAAATTTTAGATGGTTCTATGATGATTTTGGATATTTGTGGCACCACTAGGGACACCATGTTGCAAATAAAGGAAAATGTTCAAGCCCTTCATTCTTCTCTAAGGAGAAGAAAAAGTGAGTCAAGTGTTGAAAAAAGTGTGGTGGAATACAAATATTACACAAAAAATATGAAGAAAAATGTGAACAAGTTGATCACATCATTGAAACATATGGATAGTAAATTTGGGGTGACTCCAATTTTTGAACTTGATTATCACCTTTCTTCTTTGGTTAGAGTTCTTAGAGAAGTCATTGCAATGAACTTATCTATTTTTCAATTAATTTTGTCATTTTTTATTGTGTCTTCATCAAAGTCAAAGTCAAACAAATGGTTATTGGTGGCAAAATTAATGCACAAGGGTACTATAACAAGTGAAGATAACTCAGAAAGTGTGAATGAGTTGCAGTGTGTGGAAGCTGCTTTAAGCACCCTTTTAAGTGAAGCCACTTGTGGTGAAAAGTTGCAAGGTGTACATGAAAAATTGAAAACTTTGGAAAATGCAATTGAGAGCATTGAGGATGGTTTGGAGAACTTATTTAGGCGTTTGATTAAAACTAGATCCTCCCTCTTGAACATAATCTCTCAATAG 873 0.3448 MANKYNVRSISLPSRSHPSTIRVDEELNKLKTWEGTSTSTSRSIHNGLSLLEDLYISLDDLFNMTSTKQVISHHRGEKCIEEILDGSMMILDICGTTRDTMLQIKENVQALHSSLRRRKSESSVEKSVVEYKYYTKNMKKNVNKLITSLKHMDSKFGVTPIFELDYHLSSLVRVLREVIAMNLSIFQLILSFFIVSSSKSKSNKWLLVAKLMHKGTITSEDNSESVNELQCVEAALSTLLSEATCGEKLQGVHEKLKTLENAIESIEDGLENLFRRLIKTRSSLLNIISQ 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02543 290 Coils Coil 249 276 - -
Trre15g02543 290 PANTHER OS06G0725500 PROTEIN 2 288 - -
Trre15g02543 290 Pfam Protein BPS1 47 287 IPR004320 GO:0048364|GO:0048367
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02543 Trre-Chr15 21400919 21401791 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02543 - - gmx:100811784 382.874
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g02543 15 21400919 21401791 Trre15g02543 15 21400919 21401791 ECH
Trre9g01348 9 11472627 11473499 Trre15g02543 15 21400919 21401791 PCT
Trre15g02543 15 21400919 21401791 Trre9g01347 9 11464822 11465694 PCT