Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02523 ATGGCATCCTCATTACAAAACTATGTTATTGTTGTTTTACTAATTTTAGCTACAATTCAATTCAAACCTACTTCTAGCTCTTCTCATCACCACCACCATAATCACTTAAAATCTCTTCACTTTTCACTTTACCAACATGAGACAATAAACAAAACAGGATATATCATAGTAAATGGTATCAAAGAAAGTGCTGGAGTAACTGAAACAACAACACCTTTTGGAACATTATTTGTGTTTCAAGATCCTTTAACTCTTACATCAAATAGATCCTCCAAACTTGTTGGAATTGCTGAAGGTACTTCAATCACATCTAGTCTTGACGGGCTTCAAAGCATTTCGATTGCGAAACTAACTCTTCGAGTGGAAAATTATAAGGGTTCCGTTTCTATTGTTGGCGGAACAAACAATATTAAAGCTTCGGATCATCCAATTGTTGGAGGTACCGAAGATTTCATGTTTGTTCAAGGATATGTTACCTCTTCTCCCGTTGATCTTACGGGTATTACGGTTGTTTATAAGATTGAGTTTCATATTTATTGGCCTCCTTATGCAATTCAATCCTCATAA 567 0.351 MASSLQNYVIVVLLILATIQFKPTSSSSHHHHHNHLKSLHFSLYQHETINKTGYIIVNGIKESAGVTETTTPFGTLFVFQDPLTLTSNRSSKLVGIAEGTSITSSLDGLQSISIAKLTLRVENYKGSVSIVGGTNNIKASDHPIVGGTEDFMFVQGYVTSSPVDLTGITVVYKIEFHIYWPPYAIQSS 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02523 188 PANTHER DIRIGENT PROTEIN 1 187 - -
Trre15g02523 188 Pfam Dirigent-like protein 40 178 IPR004265 -
Trre15g02523 188 Gene3D - 23 179 IPR044859 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02523 Trre-Chr15 21124257 21124823 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02523 - - gmx:100817263 280.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g02523 15 21124257 21124823 Trre15g02523 15 21124257 21124823 ECH