Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02517 ATGATGGAAGGAGACATAGCAATTGAACAACATCAAAGATCGTTAGCAGCTCCTCTCGTATTTCTCATCGTTCTCGCTTTTCAGTTTGCTTCTCATTGGATTGATCTTCTCAAGAAGAGTGGATCTGAGAAGGAAAAAGAAATTAAGTTGCGTGCAGAAATAAAACAACTTTTGAAGGAGGCAAACTCCCTGTCACAGCCATCCACCTTTGCACAAGGAGCAAAACTCAAAAGACAGGCAGCTGCAAAGGAGAAGGAACTTGCAAAGTGTCAAGATTTACATGACAAGGACACAACTTTGTATTCAAATGCTCTGCTCTTCTCAAAGGTTTTAACATATTTAATTTTGCTTATCTGGTTTTGGAGTTCTCCTGTAGCTAGCATATCTCAACAACTCGTCCAACCATTTGGGAGATTATTATCTTGGAGGACTGGAGGAGTTCAAAATAACAATATTATGGTTGGCATAATACCTTGGCTAGCAGTATCTTCGAGGGTTAGCAGATTTATTTGTAAACTCAAGTATAGCAAATAG 534 0.3895 MMEGDIAIEQHQRSLAAPLVFLIVLAFQFASHWIDLLKKSGSEKEKEIKLRAEIKQLLKEANSLSQPSTFAQGAKLKRQAAAKEKELAKCQDLHDKDTTLYSNALLFSKVLTYLILLIWFWSSPVASISQQLVQPFGRLLSWRTGGVQNNNIMVGIIPWLAVSSRVSRFICKLKYSK 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02517 177 PANTHER TAIL-ANCHORED PROTEIN INSERTION RECEPTOR WRB 21 171 - -
Trre15g02517 177 Pfam CHD5-like protein 37 162 IPR028945 GO:0071816
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02517 Trre-Chr15 21065177 21075027 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02517 K22384 - gmx:100815853 281.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g02517 15 21065177 21075027 Trre15g02517 15 21065177 21075027 ECH