Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02454 ATGGAAATTCATTCTCCTAGATGCAAGTTCTCAGTGATTTTCTCCATCATTTCTCTCTCCCTTGGATTAATTTCCTTCATCTTGTGTATAGCTGCTGAGATTAAGAGAAATAAGGAGGAGGATCTTAGATGGAATGGGAAACTATGCTATATGCCAACAAGCCCAGCATTTGGATTGAGTATTGCAACATTGGTTAGTCTACTTTTTGCACATATCATTGGGAATTATGTGTTAGTAAAGAATTCTTATTCAAGATGGAAAAATATCTCCAAGTTTAAGATGCCTACTTCTGCCAAGGTTCTGTTTTTCATATCTTGGCTTAGCTTTGGAATTGTAGTTATATTATTGATTGCTGCAACAAGCATGAGTAGAAAGCAGCTCTATGGGAAAGGATGGTTGAATGGTGAATGTTACATAGTCAAAGGAGGAACTTATTCTGGCTCAGCTATATTGATCCTTGTTACAACTTGTACTCTAAATGGTTCAGTTTTCTCAAAATTAAAATATAGCCAAGCACATCAAGATCAGAAAATACACATACAAAGTGGGTGA 552 0.3587 MEIHSPRCKFSVIFSIISLSLGLISFILCIAAEIKRNKEEDLRWNGKLCYMPTSPAFGLSIATLVSLLFAHIIGNYVLVKNSYSRWKNISKFKMPTSAKVLFFISWLSFGIVVILLIAATSMSRKQLYGKGWLNGECYIVKGGTYSGSAILILVTTCTLNGSVFSKLKYSQAHQDQKIHIQSG 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02454 183 Pfam Protein of unknown function (DUF1218) 65 156 IPR009606 -
Trre15g02454 183 PANTHER OS07G0462200 PROTEIN-RELATED 14 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02454 Trre-Chr15 20371290 20372907 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02454 - - psat:127074822 266.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g02454 15 20371290 20372907 Trre15g02454 15 20371290 20372907 ECH
Trre9g01515 9 13037265 13038746 Trre15g02454 15 20371290 20372907 PCT