Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02411 ATGAGATGCAATGCATGCTGGAGAGAAGTAGAGGGGCGGGCAATTTCCACAACATGTGGTCACTTACTGTGCACTGAAGATGCCAATAAGATATTAAGCAATGATGGAGCATGCCCTATTTGTGATCAAGTCCTTTCAAAGAGTCTCATGAAACCTGTGGATGTCAATCCCAATGATGAATGGGTCAATATGGCCATGGCGGGAGTGTCTCCACAGATATTGATGAAGAGTGCATATAAAAGCGTGATGTTCTACATTGGGCAAAAAGAACTGGAGATGCAGTGTAAAATGAACAAGATTGTTGGTCAATGCCGCCAGAAATGTGAGATGATGCAAGAAAAGTTTACAGAAAAACTAGAGCAGTTGCATACTGCTTACCAAAAAATGGCCAAGAGGTGCCAGATGATGCAACAGGAGATTGAGAGCTTAACCAAGGACAATCAAGAACTTCAGGAAAAATTTGCTGAAAAATCCAGGCAAAAGAGAAAATTAGATGAAATGTATGATCAGCTGAGGAATGAGTTTGACTCTGTGAAGCGGTCAGCCATACAGCCTGCAAGCAACTTTTATTCCAGAAATGAGCGTGATTTGTTCTCCAACCCGCCTAACATATTGGATGAAAGAGAAACTGGTCGAAAAGGTCTGCCGGTATTCACTCCTATCACTCCAGGACCAAGAGAGGATGTATGGCCAGCGAGGCAGAATAGCAATAACTCTGGTCACTTCGACATATCTGTTGGTTCACCGGCAAAACAAACCATCATTGCAGGGGATGCTGGGAACAGAAGGATTGGTGCTCACCCTGTTTTTGGATCTGGTGCTACTGGTAACCCATCAATGAATTTGAGGAATTTGATACTCTCTCCAATAAAGCGACCTCAGCTCTCACGTAACCGCACCAACTTATTCACGTGA 915 0.4361 MRCNACWREVEGRAISTTCGHLLCTEDANKILSNDGACPICDQVLSKSLMKPVDVNPNDEWVNMAMAGVSPQILMKSAYKSVMFYIGQKELEMQCKMNKIVGQCRQKCEMMQEKFTEKLEQLHTAYQKMAKRCQMMQQEIESLTKDNQELQEKFAEKSRQKRKLDEMYDQLRNEFDSVKRSAIQPASNFYSRNERDLFSNPPNILDERETGRKGLPVFTPITPGPREDVWPARQNSNNSGHFDISVGSPAKQTIIAGDAGNRRIGAHPVFGSGATGNPSMNLRNLILSPIKRPQLSRNRTNLFT 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02411 304 PANTHER E3 UBIQUITIN-PROTEIN LIGASE CCNB1IP1 HOMOLOG 1 304 - -
Trre15g02411 304 FunFam E3 ubiquitin-protein ligase CCNB1IP1 homolog 1 53 - -
Trre15g02411 304 Coils Coil 119 181 - -
Trre15g02411 304 Gene3D - 97 183 - -
Trre15g02411 304 Pfam zinc-RING finger domain 2 43 IPR001841 -
Trre15g02411 304 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 53 IPR013083 -
Trre15g02411 304 SUPERFAMILY RING/U-box 2 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02411 Trre-Chr15 19948642 19950629 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02411 K10639 - gmx:100101885 577.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g02411 15 19948642 19950629 Trre15g02411 15 19948642 19950629 ECH