Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02075 ATGGGTAAGCATGTTTTGTTACTAGCTCTCATTCTTCACCTTCTCTTTGCAACACTTTCAGCTGCACCTTCCAACACTTCACCTGCAAAAATTGTTTCTGGGTTTCTCTCCAATGCTGTTCCTGCTTTTACCAAATGGGTTTGGTCCCTTAAAGCTACCACCAAAACTGGGGTTTTGAGCAAGTCAATGATGAAGTTTGAGAGTGGTTACAATGTGGAGACTGTGTTTGATGGAAGCAAGCTTGGAATTGAGCCTTATGCTGTTGAGGTTTTGCATAATGGAGAACTTCTTATTCTAGATTCTTCTAATAGTAACCTTTATAGAATCTCATCATCACTCTCTTTGTATAGCAGACCGAAACTAGTGGTTGGATCAGCTGAAGGATATTCTGGACATGTTGATGGAAGGCTCAGGGAGGCTAGGATGAACCACCCAAAAGGGATAACCGTTGATGACCGAGGAAATATATATGTTGCAGATACTACAAATATGGCAATTAGGAAAATTAGTGATTCAGGGGTCACAACAATTGCTGGAGGAAAAGGGAGCCGCGGAGGGGGCCATGTTGATGGACCAAGTGAAGAAGCTAAATTTTCTGATGACTTTGATGTGGTTTATGTTGGAAGTAGCTGTTCTCTCCTTGTTATAGACAGAGGAAACCAAGCCATCAGGGAGATCCCACTCCACTTTGATGATTGTGCATATCGATATGGCAGTGATTTCCCTCTTGGAATTGCAATGCTTGTCGGGGCTGGCTTCTTTGGTTATATGCTGGCATTGCTGCAGCGTAGGCTCAGTGCAATCGTAGAATCTCAGGATGCTCAGGTTCCAGTAACAGTAATGCCTTCTGTTTCTCCAAGTCCATATCAAAAGCCGTTGAAATCCGTACGGCCTCCTTTAATTCCATCAGTATATGAACCCGAAAAGCAGGAAGAAGGTTTCTTTGGATCTCTCGGGAAGCTTCTTTCCAATACCGGTGTATCAATGGTGGAGATAATGGGAGGACTTTTTCCTGTTTTCAGAAGAAAACCACAGAGCTATCAATATCAAAGGCAAACACTTATCCAACAACCTCAGAAGCAAGTCAATGATTGGCCAGCACAGGAAAGTTTTGTGATTCCTCGCGAAGATGAGCCGCCATCTATTGACACAAGAGCACCAACGCCTCGAAAAACCTATCCTTTCATGTCGAAAGATGCAGAAAAAATGCAACAGTTGCGGCAAAGTAAAGCATTTTATAGCGGGTGGGATGGAGATCAGCAGCAGCAGCACCATCAGCAGCAGCAGCAACAGCTACAACAGCAACAAACACATCATCATCGCCATCAGTACCAATCATCAGTCCCTCGCACTTTCTATGAGCAGAACAATGAGACAACTAATGAGGTAGTTTTCGGGGCAGTGCAGGAACAGGAGGGAAAGAAGGAATCTGTGGTCATCACGCCGGTTGAATATGGAGGTTCACTGTACGAACATCGCGATATGCGATCTCGAATGAGTTCCATGGGTTATAATTACTCTCATAAGTACTGA 1533 0.4397 MGKHVLLLALILHLLFATLSAAPSNTSPAKIVSGFLSNAVPAFTKWVWSLKATTKTGVLSKSMMKFESGYNVETVFDGSKLGIEPYAVEVLHNGELLILDSSNSNLYRISSSLSLYSRPKLVVGSAEGYSGHVDGRLREARMNHPKGITVDDRGNIYVADTTNMAIRKISDSGVTTIAGGKGSRGGGHVDGPSEEAKFSDDFDVVYVGSSCSLLVIDRGNQAIREIPLHFDDCAYRYGSDFPLGIAMLVGAGFFGYMLALLQRRLSAIVESQDAQVPVTVMPSVSPSPYQKPLKSVRPPLIPSVYEPEKQEEGFFGSLGKLLSNTGVSMVEIMGGLFPVFRRKPQSYQYQRQTLIQQPQKQVNDWPAQESFVIPREDEPPSIDTRAPTPRKTYPFMSKDAEKMQQLRQSKAFYSGWDGDQQQQHHQQQQQQLQQQQTHHHRHQYQSSVPRTFYEQNNETTNEVVFGAVQEQEGKKESVVITPVEYGGSLYEHRDMRSRMSSMGYNYSHKY 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02075 510 SUPERFAMILY NHL repeat 73 229 - -
Trre15g02075 510 Gene3D - 27 227 IPR011042 -
Trre15g02075 510 PANTHER - 29 510 - -
Trre15g02075 510 MobiDBLite consensus disorder prediction 417 447 - -
Trre15g02075 510 Pfam NHL repeat 143 168 IPR001258 GO:0005515
Trre15g02075 510 MobiDBLite consensus disorder prediction 373 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02075 Trre-Chr15 16905887 16909326 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02075 - - gmx:100781836 800.431
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g02075 15 16905887 16909326 Trre15g02075 15 16905887 16909326 ECH