Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02062 ATGGAGGAACAACAACAACAACAACCACAACAACGGAAAGGTCCTATTCCTCTCGACTTGGATACTCTTCTCGATGATACTCCGGCGGCGGAACTCGTCGTGAAACCCTCTGCTACGGCGTTCGATCAGGAGCCTCAGTCCTTTGTCGCCGGCCTCAAAGACCTCAAAGATTACGAGCTTGAAGATCACATTCGGAGAAAGAAGAATACTCTCAATACCGTCGGTAGAAACACGCCTGACGGAGGTGCCAAACTTCGCGCTATCATCAGATGCTATGAAGAAGAGGTTAATAGACGGAAAGTCAACCCTCCTCCGCAGAAAGATGATGAGAAGAAGGCTACTACCAGCTCAAATGCAGTCGGCGTGTCTAATAAACCGAGACAAGAGAATTTTCCATCTCGTCCACAGTCAGAACCCTCTTTTACAACTTGCTTTATGAAGAAATTGGATGATAAAACTAATTGTACAGCTGTTGATGCATTTAGCGATGAGAAGCAACATTTCAAGCATTGCAACAACCAGACAGTACGACCCAACGGAGAACATAAAAGAAGAAAGAGATATCGATCATCTTCAAGACAATTGCCGTTTAAATGCCCTAGAAAACTTTCCATACCTGATACTTTTAGTGATGATAAAAGGTGCCAAGCCAATTCTGTCTTATCCCTACAGACTGTTACAAGGAATCTAGAAAGACGCTACTCAAAAGATAAGGGTGCTTCTCAGGCAATTCAGTCAGATGGCTCAAGGTCCAGGAAGTGTCAACCCATTGTTGTTGATGACGACGACGATGATGATGAGGACGATGATGATGACAGCGAAGATCCTCATATTCTAGAGAGAACAGAAAACAAAGTTCCTGAATATTTGAAAGAAGCTAAGGTCTATTTTCCATCAAGAGATGATCCCGAGTGTGTTGAAATTTGTTACAACGACATGGAATGCCTTGCTCCTGAAGGCTACTTAACATCAACTATCATGAACTTTTACATGCGATATTTGCAGCAGCGAGTATCTCTGACAATATTAGACTGCTGCCAATTTTTCAACACATATTTCTACAAGAAACTTACAGAAGCTGTTTCCTGTAAGGAAAGTAGTAGCAGACAGACAATCTTTGCAAAGTTCAGGAGGTGGTGGAAGGGTGTAAATATTTTTCAAAAGGCATATGTTTTGATTCCAGTACACCAGGATCTTCATTGGAGCTTGATCATTATTTGTATCCCAGACAAAGAAGATGAATCAGGACCAATCATACTTCATTTGGATTCTTTGGGTCTTCACTCAAGTAAATCAGTTTTTGATAATATTAGAAGCTATTTGATCGAAGAGAGGAACTATTTAAATCGAGAGTGTGCTTCTTCAGATGTTCCGATTGCAGACAAAATATGGAGGTCTCTTTCTCGTAGAATTGAAACTCAAGTCATACCCGTTCCCCAACAGAAGAATGAGTATGACTGTGGCCTATTTGTGTTATACTTCATTCAGCGTTTCATGGAAGAGGCACCTGAAAGACTGAAAAAGAAAGATTTAGCAATGTTTAGCAAGCGGTGGTTCAAACCTGAAGAGGCATCCAATTTGAGAGCAAAAATCCACAACTTACTTGTAGCAGAACTGCATAATTCAATCAAGCCTGACGCCATAACATCGTCTCCATCATCTGCTGTCAGCGCAACCGAATGCCTTGAGACCACCAAGGACTCTTCCATCAAAGATGTCATCATGAGTTGCGATCCTGACATAATTGAATGA 1752 0.4161 MEEQQQQQPQQRKGPIPLDLDTLLDDTPAAELVVKPSATAFDQEPQSFVAGLKDLKDYELEDHIRRKKNTLNTVGRNTPDGGAKLRAIIRCYEEEVNRRKVNPPPQKDDEKKATTSSNAVGVSNKPRQENFPSRPQSEPSFTTCFMKKLDDKTNCTAVDAFSDEKQHFKHCNNQTVRPNGEHKRRKRYRSSSRQLPFKCPRKLSIPDTFSDDKRCQANSVLSLQTVTRNLERRYSKDKGASQAIQSDGSRSRKCQPIVVDDDDDDDEDDDDDSEDPHILERTENKVPEYLKEAKVYFPSRDDPECVEICYNDMECLAPEGYLTSTIMNFYMRYLQQRVSLTILDCCQFFNTYFYKKLTEAVSCKESSSRQTIFAKFRRWWKGVNIFQKAYVLIPVHQDLHWSLIIICIPDKEDESGPIILHLDSLGLHSSKSVFDNIRSYLIEERNYLNRECASSDVPIADKIWRSLSRRIETQVIPVPQQKNEYDCGLFVLYFIQRFMEEAPERLKKKDLAMFSKRWFKPEEASNLRAKIHNLLVAELHNSIKPDAITSSPSSAVSATECLETTKDSSIKDVIMSCDPDIIE 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02062 583 MobiDBLite consensus disorder prediction 115 142 - -
Trre15g02062 583 MobiDBLite consensus disorder prediction 93 114 - -
Trre15g02062 583 SUPERFAMILY Cysteine proteinases 298 537 IPR038765 -
Trre15g02062 583 MobiDBLite consensus disorder prediction 1 22 - -
Trre15g02062 583 Pfam Ulp1 protease family, C-terminal catalytic domain 321 523 IPR003653 GO:0006508|GO:0008234
Trre15g02062 583 PANTHER UBIQUITIN-LIKE PROTEASE 4-RELATED 40 555 - -
Trre15g02062 583 ProSiteProfiles Ubiquitin-like protease family profile. 306 498 IPR003653 GO:0006508|GO:0008234
Trre15g02062 583 MobiDBLite consensus disorder prediction 260 276 - -
Trre15g02062 583 MobiDBLite consensus disorder prediction 232 283 - -
Trre15g02062 583 MobiDBLite consensus disorder prediction 169 203 - -
Trre15g02062 583 Gene3D - 346 475 - -
Trre15g02062 583 MobiDBLite consensus disorder prediction 93 142 - -
Trre15g02062 583 Gene3D - 297 536 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02062 Trre-Chr15 16724563 16738746 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02062 K16287 - gmx:100790705 642.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g02062 15 16724563 16738746 Trre15g02062 15 16724563 16738746 ECH