Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02034 ATGGCTGAAAACAAAGACATTGAAACAGTTATCAGGAGAGTAACCTCTGTAACCAACCACCTCATTTCCTCTTCAACAACAACAACATCACCACCTCAACCAATTTCCTTGTTTCATACTTCTGGGAGTTCCAGGAATAATGATAGCTACCAACGTGTTCATGGTGATGTTCCTTCTCATGATGTTGTTTGGAAGGTTGCTTCTGATGATCAAGGAAAGGATTTCACTGACATTGTTTATGAGAAATCTGTTGGTGAAGGAATTGCTAAGATTAGTATAAATAGGCCAGAGAGAAGGAATGCTTTTCGACCTCACACGGTTAAGGAGCTTATTCGCGCTTTCAATGATGCTAGGGATGATCCCTCTGTTGGTGTCATCATTCTCACTGGAAAGGGAACAAATGCATTTTGTAGTGGTGGTGACCAAGCCTTAAGGACTGAAGATGGTTATTCCGATCATGAAAATGTTGGTCGCCTTAATGTGTTAGACTTACAGGTGCAGATTCGCCGCCTTCCAAAACCAGTAATTGCAATGGTTGCAGGGTATGCTGTTGGAGGAGGACATGTATTACATATGGTTTGTGATTTAACCATTGCAGCAGATAATGCTATTTTCGGCCAAACCGGTCCTAAGGTTGGGAGCTTTGATGCTGGTTACGGAAGTTCTATCATGTCGCGTTTGGTTGGTCCGAAAAAAGCGCGCGAAATGTGGTTTCTCGCAAGGTTCTATACTGCTGAAGAAGCCGAGAAAATGGGCCTTATCAATACTGTTGTACCACTAGAGAATTTAGAAAAAGAAACAATCAAATGGTGTAGGGAGATACTCAGAAACAGCCCAACTGCAATTCGAGTTCTCAAGGCGGCTATTAATGCAGTGGATGACGGACACGCCGGACTTCAGGAAATGGGTGGAAATTCAACATTGATATTTTATGGCACTGAAGAAGCAAATGAAGGAAAAACTGCATATATGCAACGTAGACGCCCAGATTTTTCTAAGTTTAATAGAAGACCATAA 1017 0.4199 MAENKDIETVIRRVTSVTNHLISSSTTTTSPPQPISLFHTSGSSRNNDSYQRVHGDVPSHDVVWKVASDDQGKDFTDIVYEKSVGEGIAKISINRPERRNAFRPHTVKELIRAFNDARDDPSVGVIILTGKGTNAFCSGGDQALRTEDGYSDHENVGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHVLHMVCDLTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEAEKMGLINTVVPLENLEKETIKWCREILRNSPTAIRVLKAAINAVDDGHAGLQEMGGNSTLIFYGTEEANEGKTAYMQRRRPDFSKFNRRP 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02034 338 ProSitePatterns Enoyl-CoA hydratase/isomerase signature. 176 196 IPR018376 GO:0003824
Trre15g02034 338 Gene3D - 60 277 - -
Trre15g02034 338 MobiDBLite consensus disorder prediction 21 52 - -
Trre15g02034 338 FunFam 1,4-dihydroxy-2-naphthoyl-CoA synthase 276 326 - -
Trre15g02034 338 NCBIfam 1,4-dihydroxy-2-naphthoyl-CoA synthase 75 334 IPR010198 GO:0008935|GO:0009234
Trre15g02034 338 CDD crotonase-like 78 274 - -
Trre15g02034 338 SUPERFAMILY ClpP/crotonase 74 333 IPR029045 -
Trre15g02034 338 Pfam Enoyl-CoA hydratase/isomerase 86 332 IPR001753 -
Trre15g02034 338 FunFam 1,4-dihydroxy-2-naphthoyl-CoA synthase 58 275 - -
Trre15g02034 338 Gene3D - 278 326 IPR014748 -
Trre15g02034 338 PANTHER NUCLEOSIDE-DIPHOSPHATE-SUGAR EPIMERASE 3 338 - -
Trre15g02034 338 Hamap 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 64 337 IPR010198 GO:0008935|GO:0009234
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02034 Trre-Chr15 16485998 16489985 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g02034 1 338 Acyl Lipid Metabolism Gene Families AT1G60550 76.246 0.0 537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02034 K01661 - han:110871684 550.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g02034 15 16485998 16489985 Trre15g02034 15 16485998 16489985 ECH