Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02016 ATGGTGTCTCTTCTCGTTGCAACAACATCCGACCCAGCTTCAATCAACCCAGCTAATGCCCTTTTAGCCATGCCAGGCTGGCAACCTGGACCCCATTTCCAGGATGATATCAAGAGTTTTGTGAATGAAGGGTTGAGGGTGTTGCTTCATGGAAAAAGTATAGTGGTTGAAGATTATTTGGATACAAGATGGGAACAAGTTACTGGAGAAGTTGTTGATGAAGTTATTTTCTTGAGTAAACACACTGCTGCTTCTAATAAACCTGCTCTCACTGTTCATCCTATTGGAGTTCCGCATTTGCGGGAAGGTGATGTTCCACCTCAAGGCGGGAAACCAGGATGGGCAGCACTGCCAAATCCTAGGATTGGTCCTTGGATTCGACTTTTGAAAAATATTGCTCAGGCTCATAATCTAGTCCCTGAATTCGAGATTACTCTGGAGGCCACTCATCATGGACCTTTGACAAATAAGCCAACCATGTTTCTGGAGATTGGTAGCACTGAAGACTATTGGAAGAGACAAGATGCTGCACAAGTTATGGCTCAGTTAGTCTGGGAAGGACTTGGACTTGGAGGAGGCACTGATGTGGGAAACTGGAGCAGGGAGAGTGCTAATAAAAAAGTCCTTCTTGGGATAGGTGGTGGACATTATGTGCCTCGGCATATGGATGTAGTATTGAAAGATGGTGTTTGGGTTGGTCACCTACTTTCTGGATATTCAGTGCCAATGGAAGATCCAAAAGGAGAAACAAATGTTGAGATTGGAGGAACTTGGAAACAATCTATAAAAGCCGCATATGAGGCTACTAAATCTGCTTTTCCTGGTGGCGAAATTATAGCACATCTTGACCAAAAGAGTTTCAAGAGCTGGCAGAAGAATGCCATCACAGGATTCCTCGCGGAGCAGAATATTAAAATTGGAAAACCAAATAACTTCTATTGA 942 0.4374 MVSLLVATTSDPASINPANALLAMPGWQPGPHFQDDIKSFVNEGLRVLLHGKSIVVEDYLDTRWEQVTGEVVDEVIFLSKHTAASNKPALTVHPIGVPHLREGDVPPQGGKPGWAALPNPRIGPWIRLLKNIAQAHNLVPEFEITLEATHHGPLTNKPTMFLEIGSTEDYWKRQDAAQVMAQLVWEGLGLGGGTDVGNWSRESANKKVLLGIGGGHYVPRHMDVVLKDGVWVGHLLSGYSVPMEDPKGETNVEIGGTWKQSIKAAYEATKSAFPGGEIIAHLDQKSFKSWQKNAITGFLAEQNIKIGKPNNFY 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02016 313 PIRSF UCP016210 1 309 IPR018033 GO:0016788|GO:0019478|GO:0051499
Trre15g02016 313 Pfam D-aminoacyl-tRNA deacylase 69 306 IPR007508 GO:0016788|GO:0051499
Trre15g02016 313 Gene3D - 205 312 - -
Trre15g02016 313 FunFam D-aminoacyl-tRNA deacylase 206 312 - -
Trre15g02016 313 Gene3D - 1 189 - -
Trre15g02016 313 PANTHER D-AMINOACYL-TRNA DEACYLASE 1 312 IPR007508 GO:0016788|GO:0051499
Trre15g02016 313 SUPERFAMILY AF0625-like 4 311 - -
Trre15g02016 313 FunFam D-aminoacyl-tRNA deacylase 1 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02016 Trre-Chr15 16324354 16327920 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02016 K09716 - gmx:100808796 579.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g02016 15 16324354 16327920 Trre15g02016 15 16324354 16327920 ECH