Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01995 ATGGCTGATAATAGCATATTCGGCGTCATAGGTTACGCGTTAGCACCAAAGAAACAGAACAGTTTCATCCGCGACTCACTCTTAACGCTTGCAAAATCACGCGGAATCAAACTCGTCCGAGTTGACTCAAACCGTTCTTTAGCAGATCAAGGACCGTTCGATTGTATCCTTCACAAACTCTACGGCGACGATTGGAAACGCCAGCTTCAAGAATTTCAAACTCGAAATCCAAATGCTGTTATTCTCGACGCGCCTGAAGCGATCGAACGTCTTCACAACAGAATTTCAATGCTTCAGGCTTGGGAGAGTTTGAAGTTTCCGGTGATTGCGAAACCGCTTGTCGCTGATGGTAGTGCGAAATCGCATAAAATGGCTTTGGTTTTTAGTCATAATGCTTTGAATAAACTGAAACCTCCGATTGTTTTGCAAGAATTTGTTAATCATGGTGGTGTGATTTTCAAAGTGTATGTTGTTGGTGAGCATGTTCGTTGCGTGAAGAGGAAGTCTTTACCGGATGTTTCAGAGGAAAAGGTGTTGGGGGTTTCGGAGGATTTGTTGTCGTTTTCGCAGGTTTCTAATTTGGCGAATCGGGATAGTGTGGATGATGATGAGAAGTTTTATCAGATGATGAATTTGGATGATACTACTGAGATGCCGCCTCAACCTTTTATTGTTGATATTGCTAGTGGATTGCGCCGTGCTATGAAGCTGAATCTATTCAATTTCGATGTGATTCGTGATTCTAGATATGGAAATCGGTATCTTATTATTGATATCAATTACTTTCCTGGGTATGCTAAAATGCCGGGGTATGAAAGTGTTTTGACCGAATTTTTCGTTGATTTAATGCACAAGAAAGAATTAGAAGTTAAAGAGGGTAATGTGGCAAAGATCGATGGTGGTGATGAGGTTTTAACTGAAGAAAAAGATGAATCTGTTAAGGTTTAG 948 0.4093 MADNSIFGVIGYALAPKKQNSFIRDSLLTLAKSRGIKLVRVDSNRSLADQGPFDCILHKLYGDDWKRQLQEFQTRNPNAVILDAPEAIERLHNRISMLQAWESLKFPVIAKPLVADGSAKSHKMALVFSHNALNKLKPPIVLQEFVNHGGVIFKVYVVGEHVRCVKRKSLPDVSEEKVLGVSEDLLSFSQVSNLANRDSVDDDEKFYQMMNLDDTTEMPPQPFIVDIASGLRRAMKLNLFNFDVIRDSRYGNRYLIIDINYFPGYAKMPGYESVLTEFFVDLMHKKELEVKEGNVAKIDGGDEVLTEEKDESVKV 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01995 315 Pfam Inositol 1,3,4-trisphosphate 5/6-kinase pre-ATP-grasp domain 9 88 IPR041429 -
Trre15g01995 315 ProSiteProfiles ATP-grasp fold profile. 66 288 IPR011761 GO:0005524|GO:0046872
Trre15g01995 315 Pfam Inositol 1,3,4-trisphosphate 5/6-kinase ATP-grasp domain 90 280 IPR040464 -
Trre15g01995 315 SUPERFAMILY Glutathione synthetase ATP-binding domain-like 96 269 - -
Trre15g01995 315 PIRSF ITPK 98 295 IPR008656 GO:0000287|GO:0005524|GO:0032957|GO:0047325|GO:0052725|GO:0052726
Trre15g01995 315 PIRSF ITPK 1 102 IPR008656 GO:0000287|GO:0005524|GO:0032957|GO:0047325|GO:0052725|GO:0052726
Trre15g01995 315 PANTHER INOSITOL-TETRAKISPHOSPHATE 1-KINASE 102 287 IPR008656 GO:0000287|GO:0005524|GO:0032957|GO:0047325|GO:0052725|GO:0052726
Trre15g01995 315 Gene3D - 62 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01995 Trre-Chr15 16125561 16126604 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01995 K00913 - gmx:100127430 463.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g01995 15 16125561 16126604 Trre15g01995 15 16125561 16126604 ECH