Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01855 ATGGAAACAACACTCATGTGCTTTCTTTATTATTTGTTCATAGCAATTTGTTACAGCTTTGGCAATTCAGTGCATGCTATTGAATCACCAAAGTATATAGTAATACAAACAGAATCAGATTTTGAGATCAGACTCTACAATGAATCATCATGGATCTCTGCTCCATCTTCTGGAACTAATTCCTTCCAGCAATCCACCAAAACAGGATTTCACAGGTTGTACCAATATATTCATGGTGCAAATTCAAATTCTTCCAAACTAGCAATCACTGCACCAATCTTAACAAGGATACCTTCATCAATATCTTCAGAGGTTGGCTATAGTGTAAGAATGTATGTATCACCTCACTTTCAAGGGAAACCTCCACAGTCAAATCCTGAGCTGAAGTTACAACTTGAGAAATGGAAAACTCAATGCATAGCAGTTAGGAAATTCAATGGATATGCAAAGGATGATAACATTAACAAAGAAATTGAAGCTCTTGTTAGCAGCCTAAACAAACACTTAGATGGAACTTCAACAATAATGCAAGATACAAGCTCATATACCATTGCTCAATATAATGCTTCCTTTCATAACACTGAACGGGTAAATGAAGTGTGGATAAATGTGTCAGGATTCAGAACTGATTGCTGA 636 0.3601 METTLMCFLYYLFIAICYSFGNSVHAIESPKYIVIQTESDFEIRLYNESSWISAPSSGTNSFQQSTKTGFHRLYQYIHGANSNSSKLAITAPILTRIPSSISSEVGYSVRMYVSPHFQGKPPQSNPELKLQLEKWKTQCIAVRKFNGYAKDDNINKEIEALVSSLNKHLDGTSTIMQDTSSYTIAQYNASFHNTERVNEVWINVSGFRTDC 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01855 211 SUPERFAMILY Probable bacterial effector-binding domain 22 204 IPR011256 -
Trre15g01855 211 Gene3D Regulatory factor, effector binding domain 26 208 IPR011256 -
Trre15g01855 211 FunFam Heme-binding protein 2 27 210 - -
Trre15g01855 211 Pfam SOUL heme-binding protein 27 202 IPR006917 -
Trre15g01855 211 PANTHER HEME-BINDING PROTEIN-RELATED 24 204 IPR006917 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01855 Trre-Chr15 14991407 14993414 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01855 - - psat:127074926 379.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g01855 15 14991407 14993414 Trre15g01855 15 14991407 14993414 ECH