Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01853 ATGAGTCACAGTATCTTTCATCAAACTTTGCTTTGTCAAACTCAATCGGTTGCTGAGCATCAAAGTAAGCTTAATTCTCGTGGAGTAACTGCCAATACTTTATTCCAATCACAGAGTGTTGATAAAGAAAAGAAGCTTTTACTTTCTACAAAATTTCGCGGGAATAAGTTGTTTATTAGGAAACGGAAAGTTGTTATGGGAAGGAATCAAGCTATTCCACGCGCTGTGTTAACTTCGAATGCGGGTTCTCAGCTTTCGGAGAAGTTCAACCTCGATGGAAATATTGAATTGCAGGTCAGTGTTGGTTCTTCAGGATCAGGAGCCGCAACACAAGTAGATGTTCAGCTTTCAAATACTAGTGGCTCTTTTGTTTTACATTGGGGAATTATATGTCAAAGTCAAGGGAAGTGGGTACTTCCTTCTCGTCACCCAGATGGAACTCAAGTTTATAAGAATAGAGCTCTCAGAACTCCTTTTGTAAAATCTGGCTCAGTATCCTTACTTAGGATAGAAATTGATGATCCTGCTGCACAAGCCATCGAGTTCCTTATAATTGACGAAGCTCAGAACAAGTGGTATAAAAACCATGGCGATAACTTTCACATCAAGTTACCAGTAAAAGATAAGCTAGTTCAGCAAGTTTCAGTTCCTGAAGACCTTGTACAAATTCAAGCATATATTAGGTGGGAACGAAAGGGTAAGCAGTCATACAACCCAGAGCAAGAAAAGGAGGAATATGAAGCGGCTCGACGTGAATTATTGGAGGAAGTAGCTAGGGGTACTTCTGTACAAGACATTCGTGCAAGGTTGACTAATAAATCTAACGAGGGTGAAGTAAAGGAGCCTAACAATGCTAATGCTGCTGAAGTAAAGCAGCCTTCTGTTTCAAAAACAAAGACCATCCCTGACGAACTTGTACAGATTCAAGCTTTTCTACGATGGGAAAAAGCTGGGAAGCCTAATTATTCTCCAGAACAACAACTTATTGAATTTGAGGAAGCAAGAAAAGAGTTGCAAGCTGAGCTTGAGAAGGGTGCCTCTGTGGATGAGATACAAAAGAAGATTACCAAAGGAGAGATACAAACCAAAGTTTCCAAGCAATTGAAAACCAAAAAATACTTCCGCTCTGACCGAATACAACGGAAAAAGAGAGATTTGACGCAGCTTATCAACAAAAGTGCTGCTGAAAACATAGACCAACAAATTGTAGATGCAAACCAACAATCTATAGATGCTCCAAAGACTTTGAAAGTAATTGAAAGATATGCCAAGGCAAGGGAGGAATTTGATACGGGTAGTGTTTTAAATAGAAAAATTTACAAGCTTGCTGATAATGATCTTTTGGTCCTCATTACCAAAGATGGTGGTAAGATAAAGGTTCACCTGGCTACAGACTACAAAATACCTGCTACACTTCACTGGGCCTTATCTAGAACAACACCTGGAGAGTGGTTGGCACCACCTGCAAGTTCTATACCCCCTGGGTCTGTTATTATGGATAAGGCTGCAGAAACACCTTTTAAAGCTGGTTCTTCATCTGATCCTTCTTCTGAGGTCCAGTCTTTAGATATAGAGGTCAATGATGACACGTTTGGAGGATTAACTTTTGTCATTCTATCAGACGGAAAGTGGTTAAAGAACAATGGATCAGATTTTTCTATTGAATTTGGTGGGAAGAAGCAGATACAAAAGGATGTTGGTGATGGCAAAGGCACAGCTAAGTCCTTGCTGGATAAAATAGCAGAAATGGAAAGTGAGGCACAAAAGTCCTTTATGCATAGATTTAATATTGCAGCGGATTTGATAGATCAAGCCAAAAATGCCGGTCATTTGGGTCTTGCGGGTATTTTGGTATGGATGAGATTTATGGCTACCAGACAGCTCATATGGAACAAAAATTACAATGTGAAACCACGTGAGATAAGTCAAGCCCAGGATAGGCTTACAGAGTTGCTCCAGAATGTTTATGCAAGTTATCCACAGTACAGGGAAGTTGTGAGGATGATCCTTTCTACTGTTGGCCGTGGAGGTGAAGGTGATGTGGGACAGCGTATTCGAGACGAAATCCTTGTCATCCAGAGTAAAAATCATTGCAAGGGTGGAATGATGGAGGAATGGCACCAGAAGTTACACAATAATACTAGTCCTGATGATGTTGTAATCTGTCAGGCACTAATTGATTACATAAGTAGCGACTTTGATATTGCTGTTTATTGGAAAACATTGAATGACAATGGAATAACAAAAGAACGTCTTCTGAGTTATGACCGTGCCATCCGTAATGAACCCAATTTTAGTAGAGATCAGAAGGAAGGTCTTTTGCGAGATCTGGGACACTACATGAGGACATTGAAGGCAGTTCATTCTGGTGCAGATCTTGAATCAGCAATTACAAACTGCTTAGGCTACAAATCTGAGGGTCAGGGCTTCATGGTTGGGGTGCAGATAAATCCAGTGCCTGGTTTGCCATCTGGTTTTACTGAATTAGCTCAGTTTATCATGGAACATGTTGAAGAAAAGAATGTTGAACCTCTGCTTGAGGGTTTGCTTGAGGCTCGTCAGGATCTACGACCATTACTGAATAAGTCCCAAAGTCGCCTGAAAGATCTTTTATTTTTGGATATTGCCCTTGATTCTACGGTTAGAACAGCAGTGGAAAGGGCATATGAGGAATTAAATAATGCCGCACCTGAGAAAATAATGTACTTTATCTGCTTGGTACTTGAAAACCTTGCACTTTCATCAGACGACAATGAAGATCTCATCTTCTGTTTGAAGGGATGGAATCTTGCCTTAAGCATGTGTGAAGGTAAAGACACTCAGTGGGCATTGTATGCAAAGTCAGTCCTTGACAGAACACGCCTTGCACTCACAAATAAGGCAGAGTCATACCAGAAAATTCTTCAGCCATCGGCTGAATATCTTGGATCATTACTTGGCGTGGAAAATTGGGCTGTGGAAATATTTACTGAAGAAATTATCCGTGCTGGATCTGCAGCTTCTTTGTCTACTCTTGTAAATCGACTAGATCCTGTACTCCGAAAGACTGCTAATCTTGGAAGTTGGCAGGTTATTAGCCCAATTGAAACCGTTGGATATGTTGAGGTCGTGGATGAGTTGCTAGCTGTTCAAAACAAAACATATGAGCGACCTACAATTTTGATAGCCAAGAGCGTGAAGGGAGAGGAGGAAATTCCAGATGGTACAGTTGCTGTCCTGACACCTGATATGCCAGATGTCCTTTCTCATGTATCTGTACGAGCAAGAAATAGCAAGGTGTGTTTTGCGACATGTTTTGATCCCGATATCTTTGCTGACCTCCAATCAAATAAAGGAAAGCTCTTGCGCTTAAAGCCTACGTCTGCTGAGGTAGTTTACAGTGAGGTCAAGGAGGGTGAGGATATTGATGACAAATCAACCGACCTGAAAGAAGTTGGTTCTGTTCCAACTTTATCTTTGGTCAGAAAGCAGTTCAGTGGTAGATATGCTATCTCATCTGAAGAATTCACTGGTGAAATGGTTGGAGCTAAATCTCGTAATATCTCTTACTTGAAAGGAAAGGTGCCTTCTTGGGTAGGAATTCCTACCTCGGTTGCCTTACCATTTGGAGTTTTTGAACATGTTCTCTCTGATAAGTCAAATCAGGTTGTGGCTGAGAAGGTCAATATTTTAAAAAAGAAGCTAACTGAAGGAGACTTCAGTGCCCTCAAGGAGATTCGTGAAACAGTTTTAGAGTTGAATGCTCCACCCAAGTTGGTAGAGGAGTTGAAAACTACAATGAAGGGTTCTGGGATGCCTTGGCCGGGTGATGAAGGTGAACAACGCTGGGGACAGGCATGGAAGGCTATAAAAAAAGTGTGGGGCTCAAAGTGGAACGAAAGAGCGTACTTCAGCACAAGAAAAGTAAAACTGGACCACGATTATCTTTCCATGTCCGTCCTTGTACAGGAAGTGATTAATGCTGACTATGCTTTTGTCATCCACACAACCAATCCGACCTCTGGAGACTCTTCAGAAATATATACAGAGGTTGTAAAGGGACTTGGTGAAACACTGGTTGGAGCTTATCCCGGCCGTGCTTTGAGTTTTATCTGCAAAAAACATGATTTGAACTCTCCTCAGGTCTTGGGTTATCCTAGCAAACCTATCGGGCTATTTATAAGACGGTCAATAATTTTTCGGTCTGATTCCAATGGCGAAGATCTCGAAGGTTATGCTGGTGCTGGTCTTTATGACAGTGTGCCAATGGATGAAGAAGAGAAAGTGGTGCTAGATTACTCATCAGATAAACTGATGATTGATGGTAGTTTTCGCCAGTCTATCTTGTCAAGCATTGCCCGTGCAGGACATGCAATCGAAGAGTTGTATGGCACTCCTCAGGACATTGAAGGTGTCATCAAGGATGGAAAAGTCTATGTTGTCCAGACCAGACCACAAGTGTAG 4443 0.4148 MSHSIFHQTLLCQTQSVAEHQSKLNSRGVTANTLFQSQSVDKEKKLLLSTKFRGNKLFIRKRKVVMGRNQAIPRAVLTSNAGSQLSEKFNLDGNIELQVSVGSSGSGAATQVDVQLSNTSGSFVLHWGIICQSQGKWVLPSRHPDGTQVYKNRALRTPFVKSGSVSLLRIEIDDPAAQAIEFLIIDEAQNKWYKNHGDNFHIKLPVKDKLVQQVSVPEDLVQIQAYIRWERKGKQSYNPEQEKEEYEAARRELLEEVARGTSVQDIRARLTNKSNEGEVKEPNNANAAEVKQPSVSKTKTIPDELVQIQAFLRWEKAGKPNYSPEQQLIEFEEARKELQAELEKGASVDEIQKKITKGEIQTKVSKQLKTKKYFRSDRIQRKKRDLTQLINKSAAENIDQQIVDANQQSIDAPKTLKVIERYAKAREEFDTGSVLNRKIYKLADNDLLVLITKDGGKIKVHLATDYKIPATLHWALSRTTPGEWLAPPASSIPPGSVIMDKAAETPFKAGSSSDPSSEVQSLDIEVNDDTFGGLTFVILSDGKWLKNNGSDFSIEFGGKKQIQKDVGDGKGTAKSLLDKIAEMESEAQKSFMHRFNIAADLIDQAKNAGHLGLAGILVWMRFMATRQLIWNKNYNVKPREISQAQDRLTELLQNVYASYPQYREVVRMILSTVGRGGEGDVGQRIRDEILVIQSKNHCKGGMMEEWHQKLHNNTSPDDVVICQALIDYISSDFDIAVYWKTLNDNGITKERLLSYDRAIRNEPNFSRDQKEGLLRDLGHYMRTLKAVHSGADLESAITNCLGYKSEGQGFMVGVQINPVPGLPSGFTELAQFIMEHVEEKNVEPLLEGLLEARQDLRPLLNKSQSRLKDLLFLDIALDSTVRTAVERAYEELNNAAPEKIMYFICLVLENLALSSDDNEDLIFCLKGWNLALSMCEGKDTQWALYAKSVLDRTRLALTNKAESYQKILQPSAEYLGSLLGVENWAVEIFTEEIIRAGSAASLSTLVNRLDPVLRKTANLGSWQVISPIETVGYVEVVDELLAVQNKTYERPTILIAKSVKGEEEIPDGTVAVLTPDMPDVLSHVSVRARNSKVCFATCFDPDIFADLQSNKGKLLRLKPTSAEVVYSEVKEGEDIDDKSTDLKEVGSVPTLSLVRKQFSGRYAISSEEFTGEMVGAKSRNISYLKGKVPSWVGIPTSVALPFGVFEHVLSDKSNQVVAEKVNILKKKLTEGDFSALKEIRETVLELNAPPKLVEELKTTMKGSGMPWPGDEGEQRWGQAWKAIKKVWGSKWNERAYFSTRKVKLDHDYLSMSVLVQEVINADYAFVIHTTNPTSGDSSEIYTEVVKGLGETLVGAYPGRALSFICKKHDLNSPQVLGYPSKPIGLFIRRSIIFRSDSNGEDLEGYAGAGLYDSVPMDEEEKVVLDYSSDKLMIDGSFRQSILSSIARAGHAIEELYGTPQDIEGVIKDGKVYVVQTRPQV 1480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01853 1480 Gene3D - 1270 1319 IPR013815 GO:0005524
Trre15g01853 1480 PANTHER ALPHA-GLUCAN WATER DIKINASE 1, CHLOROPLASTIC-RELATED 60 293 - -
Trre15g01853 1480 SUPERFAMILY Glutathione synthetase ATP-binding domain-like 1172 1479 - -
Trre15g01853 1480 Pfam Pyruvate phosphate dikinase, AMP/ATP-binding domain 1279 1479 IPR002192 GO:0005524|GO:0016301|GO:0016310
Trre15g01853 1480 MobiDBLite consensus disorder prediction 272 296 - -
Trre15g01853 1480 Gene3D - 1320 1479 - -
Trre15g01853 1480 MobiDBLite consensus disorder prediction 277 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01853 Trre-Chr15 14975436 14990528 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g01853 462 554 Glycoside Hydrolase AT1G69830 36.634 5.69e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01853 K08244 - gmx:100802675 2409.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g01853 15 14975436 14990528 Trre15g01853 15 14975436 14990528 ECH