Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01845 ATGGCAATCAAAGAATTTCAGGAAAAAGAACTAGAAGATCCCATCCATGGAGACATCTTAGAAGCCACACTCTCGCACGTGCCACTAATTTACTTGGTGCCAGCTAGTTACGTGTCAAAAGATTGGAACGGTGCCGTATCAAGGTCCCTCCGCCACATCAACCCCGTGAAGCCGTGGCTCATGTTTCACACACAAAACCCCCGTGCTCCTCACATGACCACAACCTATGCATACGACCCACGCTCGCTATCGTGGATTGAAATTCACGCGCCACAAATTAAACACACTTCCGCTCTACGATCATCTCACGCCACGCTCCTCTACACGCTCTCTCCTACTGAATTATCTTTCTCTATAGACCCGCTCCACCTCACGTGGCACAACGCGTCATCACCAAGTGTTTGGCGCGTCGATCCCATTGTTGCACATGTGGGAAACCACATCTTTGTTGTTGGTGGCGCTTGTGACTTTGAGGATGATCCTTTAGCTGTGGAGATGTATGATATAGAGTCTCACAATTGGATCCGATGTCAGTCGATGCCTGAGATGATGAAGGACACCACAACATTGACTTGGCTCTCTGTTGTCGTTGTTGGAGAGTTTTTGTACTTGATAGTGAAAAATATTGGCATAATGTACTCGTTCAATTGTAAAATGATGACGTGGCAAGGACCATTTGATCTCCGAGGGGAGGAGAATGCATTTTACTACGCAGGGGGAACGGTGCAGAATCGTTTGGTGGTGGCGGGAATAATAGGTGATGCGGAAAATGTGAAAGGAGTGAAAGTTTGGGAAGTAAAAGACGAATTGGAGTTAGGATTGAGAATGGTGGAATTAGGTGTGATGCCAAAAGAGATGATTGTAAAACTGAGAGGTGAGAGTGGGAGTGAGTTGTTGAATTCAATTGAGTTGGTTTCGATAGGAGATTTTGTGTATGTTTATAATGCGTCGGAACCGGAGGAGATGGTGGTGTGTGAGGTGTTGAAGAGAGGAGGGTGTGAGTGGTGGAGTGTGACGAATGCAGTGGTGAATGACGAAATGCGGATGAGAAGAATGGTGTTGGGTGGTGCTGATGTGGGATTGGAGGATTTGAAAAGCGCGACTTTACGTAATTGTAAATTTGTAATGAAACAATAA 1137 0.46 MAIKEFQEKELEDPIHGDILEATLSHVPLIYLVPASYVSKDWNGAVSRSLRHINPVKPWLMFHTQNPRAPHMTTTYAYDPRSLSWIEIHAPQIKHTSALRSSHATLLYTLSPTELSFSIDPLHLTWHNASSPSVWRVDPIVAHVGNHIFVVGGACDFEDDPLAVEMYDIESHNWIRCQSMPEMMKDTTTLTWLSVVVVGEFLYLIVKNIGIMYSFNCKMMTWQGPFDLRGEENAFYYAGGTVQNRLVVAGIIGDAENVKGVKVWEVKDELELGLRMVELGVMPKEMIVKLRGESGSELLNSIELVSIGDFVYVYNASEPEEMVVCEVLKRGGCEWWSVTNAVVNDEMRMRRMVLGGADVGLEDLKSATLRNCKFVMKQ 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01845 378 Gene3D - 59 318 IPR015915 GO:0005515
Trre15g01845 378 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 15 290 - -
Trre15g01845 378 SUPERFAMILY Kelch motif 60 264 IPR015915 GO:0005515
Trre15g01845 378 Pfam Kelch motif 141 181 IPR006652 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01845 Trre-Chr15 14937944 14939080 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01845 - - gmx:100799807 454.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g01845 15 14937944 14939080 Trre15g01845 15 14937944 14939080 ECH