Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01839 ATGATGAATTATTGGATTGACCGATTCAATTCCATTGACTTTCACCATGAATCTTACCCTGCTTATGAAGATTTCTACCTTCTTCCTTTCTTCGCTCTCTTCTTCCCTTCCATTCGCTTCCTTCTCGATAGATTCCTTTTCGAGAAAATTGCTAGAAGATCGATTTTCGGAAAGGGGAATGGGAAGTTGGACTACCAGACAGATGATACACGAAAGAGGATTAATAAATTTAAGGAATCAGCTTGGAAATGTGTTTATTATCTTTCAGCTGAGCTCCTTGCTCTGTCTGTAACTTATGACGAACCATGGTTTAGCAATACAAGATATTTTTGGGTGGGGCCGGGAAGTCAGGTCTGGCCAGATCAAAAGATTAAGTTGAAATTGAAGGCAGTCTATATGTATACTGCTGGATTTTATTCATACTCCATTTTCGCTTTAATATTTTGGGAAACAAGGCGCTCTGACTTTGGGGTTTCCATGAGTCATCACGTTGCTACTGTCATTCTCATTGTGTTGTCTTACATTTTTAGGTTTGCTCGTGTTGGATCAGTTGTTTTAGCCATTCATGATGCTAGTGATGTGTTTCTCGAGATAGGGAAAATGTCCAAATATAGTGGTGCTGAAACAACGGCTAGCACAGCATTTATTCTATTTGTTTTATCTTGGGTCATATTGCGCCTCATTTACTACCCATTCTGGATTCTTTGGAGTACAAGCTATGAAGTTCTGCTCACCTTGGATAAGGATAAACACAAAGTGGAGGGTCCAATATATTATTATATGTTCAATAGTCTTCTATACTGCTTGCTGGTGATGCATATTTATTGGTGGGTGTTGATATATCGGATGCTTGTTAAACAAATCCAAGCTAGAGGAAAACTTAGTGAAGATGTTCGATCTGATTCAGAAGATGAACACGAAGATTGA 927 0.3862 MMNYWIDRFNSIDFHHESYPAYEDFYLLPFFALFFPSIRFLLDRFLFEKIARRSIFGKGNGKLDYQTDDTRKRINKFKESAWKCVYYLSAELLALSVTYDEPWFSNTRYFWVGPGSQVWPDQKIKLKLKAVYMYTAGFYSYSIFALIFWETRRSDFGVSMSHHVATVILIVLSYIFRFARVGSVVLAIHDASDVFLEIGKMSKYSGAETTASTAFILFVLSWVILRLIYYPFWILWSTSYEVLLTLDKDKHKVEGPIYYYMFNSLLYCLLVMHIYWWVLIYRMLVKQIQARGKLSEDVRSDSEDEHED 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01839 308 PANTHER LONGEVITY ASSURANCE FACTOR 1 LAG1 68 307 IPR016439 GO:0046513|GO:0050291
Trre15g01839 308 SMART lag1_27 75 289 IPR006634 GO:0016020
Trre15g01839 308 Pfam TLC domain 76 282 IPR006634 GO:0016020
Trre15g01839 308 ProSiteProfiles TLC domain profile. 75 289 IPR006634 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01839 Trre-Chr15 14850518 14855994 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01839 - - gmx:100807444 544.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g01839 15 14850518 14855994 Trre15g01839 15 14850518 14855994 ECH