Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01778 ATGGGAAAGAGCAAGGTTCTAGTAGTGGGAGGAACAGGTTACATAGGAAGAAGAATAGTGAAAGCAAGCTTAGAACAAGGACATGAAACCTATGTGATTCAAAGACCAGAGTTAGGCCTTCAAATTGAGAAGCTTCAAAGGCTTCTTTCATTCAAGAAACAAGGTGCTCATCTTGTTGAAGCATCTTTTTCAGATCATAAGAGCCTTGTTGATGCTATCAAGAAAGTTGATGTTGTCATTAGTGCCATCTCAGGTGTTCATATTAGGAGTCATAGTATTGGTTTGCAACTTAAACTTGTTGATGCCATCAAAGAAGCTGGTAATATTAAGCGTTTCTTGCCTTCGGAATTTGGTCTAGACCCGGCAAGAATGGGACATGCATTGGAGCCAGGAAGGGTAACATTTGATGACAAAATGGCCGTAAGAAAAGCAATCGAAGAAGCTAACATCCCTTTCACTTACATCTCTGCTAACCTTTTTGCTGGATACTTTGCTGGCAGCCTCTCTCAGATGGGGTCATTTGTTCCTCCAAGGGACAAGGTTCATCTCTTTGGAGATGGCACACTCAAAGCTGTTTTTCTGGATGAATATGATGTTGCAACATATACAATCAAGACAATCGATGATCCTCGAACCTTAAACAAAACCTTATACCTTAGACCACAAGATAACATTCTCTCCCAAGGAGAACTGATTGGAATTTGGGAGAAACTTATTGGAAAGGAACTGGAGAAGACATATATACCTCCTGAGGGCTTTCTTACAACATTGAAAGGGTTGGATTATAAGCTTCAAGTAGGAATTGGACACTTCTATCATATTTTCTATGAAGGTTGTTTGACAAACTTTGAAATTGGAGAAGATGGAGAAGAAGCATCAAAGCTTTACCCTGAGGTGAATTACACACGCATGGATGAGTACCTAAAAATTTATGTGTAA 939 0.3962 MGKSKVLVVGGTGYIGRRIVKASLEQGHETYVIQRPELGLQIEKLQRLLSFKKQGAHLVEASFSDHKSLVDAIKKVDVVISAISGVHIRSHSIGLQLKLVDAIKEAGNIKRFLPSEFGLDPARMGHALEPGRVTFDDKMAVRKAIEEANIPFTYISANLFAGYFAGSLSQMGSFVPPRDKVHLFGDGTLKAVFLDEYDVATYTIKTIDDPRTLNKTLYLRPQDNILSQGELIGIWEKLIGKELEKTYIPPEGFLTTLKGLDYKLQVGIGHFYHIFYEGCLTNFEIGEDGEEASKLYPEVNYTRMDEYLKIYV 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01778 312 Gene3D - 4 297 - -
Trre15g01778 312 Pfam NmrA-like family 6 274 IPR008030 -
Trre15g01778 312 CDD PCBER_SDR_a 5 307 IPR045312 GO:0016491
Trre15g01778 312 PANTHER PINORESINOL REDUCTASE-RELATED 1 311 - -
Trre15g01778 312 Gene3D - 158 308 - -
Trre15g01778 312 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 259 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01778 Trre-Chr15 14255072 14257301 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01778 K21568 - gmx:100786578 587.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g01778 15 14255072 14257301 Trre15g01778 15 14255072 14257301 ECH