Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01764 ATGGCTACCACCACTACATTGAAGCTCTCACTGTTCTTAACTATCATCTCAGTTTCACTATCGGGTATCCTATCAGTCTTTCCCCCAACATGTGAGCGAATAGAGTGTCCCAGCTATGATGTCATAGAAGCGGGAAATGGCTATGAAATCCGTCGCTATAATTCATCTGTTTGGATTTCCAATTCTCCCATTCAAGACATTTCTCTTGTTGAAGCTACAAGAACTGGTTTCAGGAGGCTATTTGATTACATTCAGGGGAAGAACAACTACAAGGAAACAATTGAGATGACAGGACCTGTGCTCTCTGAAGTCTTACCCAGTGATGGACCCTTTTGTGAGTCCTCATTTATTGTAAGCTTTTATGTACCTAAAAAGAACCAAGCAAATCCACCTCCTGCAAAGGGTCTTCATGTTCAAAGATGGAAACCTGTGTATGCAGCAGTTAGACAGTTCGGTGGATTTCTCAAAGATACAGACGTTGGTGAGCAGGCTGCAGCGTTGAAGGAAAGTATTGCCGGTACTAAGTGGTCTTCTGCTATTGATCAAAGCCATAGAGCTGGTCATGCTTCAGTTTACTCTGTTGCTCAGTATAATTCACCTTTTGAATTTGATAATAGGGTCAATGAGATATGGTTCTTGTTCAATTTGGAAAATGGCGTGCATCACGCCGCTTCTGTTATGTAA 684 0.4196 MATTTTLKLSLFLTIISVSLSGILSVFPPTCERIECPSYDVIEAGNGYEIRRYNSSVWISNSPIQDISLVEATRTGFRRLFDYIQGKNNYKETIEMTGPVLSEVLPSDGPFCESSFIVSFYVPKKNQANPPPAKGLHVQRWKPVYAAVRQFGGFLKDTDVGEQAAALKESIAGTKWSSAIDQSHRAGHASVYSVAQYNSPFEFDNRVNEIWFLFNLENGVHHAASVM 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01764 227 FunFam Heme-binding protein 2 34 220 - -
Trre15g01764 227 Pfam SOUL heme-binding protein 34 212 IPR006917 -
Trre15g01764 227 PANTHER HEME-BINDING PROTEIN-RELATED 28 215 IPR006917 -
Trre15g01764 227 SUPERFAMILY Probable bacterial effector-binding domain 26 214 IPR011256 -
Trre15g01764 227 Gene3D Regulatory factor, effector binding domain 33 222 IPR011256 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01764 Trre-Chr15 14178391 14180219 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01764 - - gmx:100809242 343.584