Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01763 ATGGAACCACCGACATCCACCTCCATCGCCACCACATCTTCAAAGCCACGAAGCTACTGGCGATGGAGCAAACAAGATTTCTTTCCTGAACCATCCTTCCAAACCGGTAAAACTTACAGAGACGCTATAGCAAATACTTGTCCACGCCTCAAAGACCGTCTCCTTAACCGATCAACTGACTCTCATGAACTCCTCGTTCTTCCAAAAGCCAGCGAGAATCGTATGCCTCGTGTCCTCACCTGGTGGGACCTAACCTGGCTCGCTTTCGGCGCCGTCGTCGGTTCCGGTATCTTCGTTGTTACAGGTCAAGAAGCTCGTTTCCATGCTGGTCCCGCCATTGTTCTCTCCTATGCTGCATCTGGCTTCTCCGCTCTTCTCTCCGCCTTCATCTATGCCGAATTCGCCGTTGAAGTTCCCGTTGCCGGTGGTTCGTTTTCCTTCTTACGAATCGAACTCGGCGATTTCCTTGCTTTCATCGCCGCCGGTAACATCCTCCTCGAAGCTCTCGTTGGTGCCGCCGGTCTCGGTCGTTCGTGGTCTTCTTACTTTGCCACAATGATTAAAAACGATTCGGATTATTTCCGGATCCGAGTCGACTCATTCAAAACCGGTTTCAACTTGCTCGATCCGTTAGCCGTTGCGGTTCTGTTAATAACTAACGGAATCGCTGCCAGTGGAACTCGAAAAACGTCTATCTTAACGTGGTTAACTTCAATTGTCACAACTTTTATAATCGGTTTCATCATAGTAATCGGTTTTATTAACGGAAAATCGTCAAACTTAACGGATTTTTTTCCCTACGGTGCTAAAGGTGTTTTTAACGCCGCTGCTGTTGTGTATTGGTCTTACACAGGTTTTGATATGGTTGCAACTATGGCTGAAGAAACAAAAAACCCTTCTAGAGATATACCAATTGGTTTAATCGGTTCAATGTCGATGATTACAGTTATTTATTGTTTAATGGCTTTAGCACTTGTGTCAATGGTTAAGTACACTGAGATTGATGCTGAAGCTGCTTTTTCAGTTGCTTTTGTTCAAATTGGTATGAAATGGGGTAAATATTTAGTGAGTATTTGTGCTTTGAAAGGAATGACAACAAGTTTGCTTGTTGGGTCAATGGGACAAGCTAGGTACACAACTCAAATTGCAAGATCACATATGATTCCACCTTTTTTTGCACTTGTTCATCCTAAGACTGGAACACCTATTAATGCTACGCTTTTGACGATGTTATCGAGTTGTGTTGTTGCTCTTTTTACTAGTTTGGATGTTTTGTCTAGTGTTTTTTCTGTAAGTACTCTTTTTATTTTTATGCTTATGGCTGTTGCATTGCTTGTGAGGAGATATTATGTGAGGGAAGTAACTGATAAGAGTGATTTATGGAAGGTTCTTTCATGTTTGTTTGTTATTATTGGTTCTTGTGTTGTTGGGGCTGTGCTATGGAACTCTGGTTTGTTTGGTTGGATTGGGTATACCGTCGCTGCTTGTGTTTGGTTTTTCGCGACTTTGGTGATGAGTTTTCTTCCGAAAAAGAGGCAACCGAAGGTTTGGGGTGTTCCGTTGGTTCCATGGGTGCCTTCTTTGTCGATTGCGACAAACCTTTTTCTTATGGGATCGTTGGATTCTGTGGCTTTCTTTAGATTCTTGATTTGTACTGGTGTGATGCTTTTGTATTATTTATTTGTGGGTGTTCATGCTACTTATGATGTAGATCGTGGAATTGGTCAAGAATCAAATCATGATGAGAGAATGGAAGGTGCCAATTGA 1767 0.4284 MEPPTSTSIATTSSKPRSYWRWSKQDFFPEPSFQTGKTYRDAIANTCPRLKDRLLNRSTDSHELLVLPKASENRMPRVLTWWDLTWLAFGAVVGSGIFVVTGQEARFHAGPAIVLSYAASGFSALLSAFIYAEFAVEVPVAGGSFSFLRIELGDFLAFIAAGNILLEALVGAAGLGRSWSSYFATMIKNDSDYFRIRVDSFKTGFNLLDPLAVAVLLITNGIAASGTRKTSILTWLTSIVTTFIIGFIIVIGFINGKSSNLTDFFPYGAKGVFNAAAVVYWSYTGFDMVATMAEETKNPSRDIPIGLIGSMSMITVIYCLMALALVSMVKYTEIDAEAAFSVAFVQIGMKWGKYLVSICALKGMTTSLLVGSMGQARYTTQIARSHMIPPFFALVHPKTGTPINATLLTMLSSCVVALFTSLDVLSSVFSVSTLFIFMLMAVALLVRRYYVREVTDKSDLWKVLSCLFVIIGSCVVGAVLWNSGLFGWIGYTVAACVWFFATLVMSFLPKKRQPKVWGVPLVPWVPSLSIATNLFLMGSLDSVAFFRFLICTGVMLLYYLFVGVHATYDVDRGIGQESNHDERMEGAN 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01763 588 Gene3D Amino acid/polyamine transporter I 75 508 - -
Trre15g01763 588 FunFam Cationic amino acid transporter 5 73 508 - -
Trre15g01763 588 Pfam Amino acid permease 79 511 IPR002293 GO:0016020|GO:0022857|GO:0055085
Trre15g01763 588 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 58 568 - -
Trre15g01763 588 Pfam C-terminus of AA_permease 517 566 IPR029485 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01763 Trre-Chr15 14172328 14174094 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g01763 14 583 Organic Solute Cotransporters AT1G17120 71.804 0.0 810
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01763 - - gmx:100811241 907.131