Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01676 ATGGCGAAAAAAGCTGTGTTGATTGGAATCAATTATCCTGGAACAAAAGCAGAGTTAAGAGGATGTGTTAACGATGTTTGGAGGATGCACAAATGTTTGATAGAACGATACGGTTTTTCTGAAAATGATGTAACCGTTTTGATCGACACAGATTCATCGTACACGGAGCCGACAGGGAAGAATATACGAAGTGCGCTGTCGGATTTGGTTGGATCGGCGGAGGAAGGAGATGTTTTGTTCGTTCATTACAGTGGACATGGGACTCGTCTTCCTGCTGAAACTGGAGAAGATGATGATACTGGTTACGATGAATGTATCGTTCCTTCTGATATGAATCTCATCACTGATGATGATTTCAAGGAATTTGTGAATGGGGTTCCTAGAGGATGTAGGTTGACAATTGTATCTGATTCATGCCATAGTGGTGGCTTGATTGAAGAAGCTAAGGAGCAGATAGGAGAGAGCACAAAGGGAGAAGAGGAACATTCTGGATCCGGCGGTTTTGGATTGTCAGGTTTTCTGCATAGGAAAGTGGAAGATGCTATTGAGTCGCGAGGATTTCATGTCCCTTCAGGATTGCGCAGTCATCCACACAGGAATGAAGAAGAAAATGAAGATAGGGATATTGAACTCCCACATGGGGTTAAGAATAGGTCTCTACCACTTTCAACCCTCATTGATATACTTAAGCAGAAAACTGGAAAAGAAGATATCAACGTTGGTCAACTGAGACCCACACTTTTCGATGTTTTTGGGGAAGATGCTAGCCCAAAAGTCAAGAAGTTTATGAACGTTATCTTGAACAAACTCCAACATGGAGGTGGTGAAGGTGAACAAGGTGGGATACTTGGAATGGTGGGTAGTCTTGCTCAAGAGTTTCTCAAGGCAAAGCTGGATGGTAATGATGAGGGATATGCAAAACCTGCCATGGAGACAAAAGTTGAAAATAAGCATGAAGTGTATGCTGGATCATCAAAGCGTGGTCTTCCGAGTGGTGGGATTCTAATGAGCGGTTGCCAGACAGACCAGACATCAGCAGATGCTTGTCCTTCAGGAAATCCAGCTAATGCTTATGGAGCTTTCAGCAATGCAATACAGGCTATAATTCAAGAGTCTGATGGTGCAATTACATATTCAGAGCTTATTCTCAAGGCTAGGCAGAAGCTACAGAAGGATGGTTTCACTCAAAAGCCTGGACTCTATTGCAGTGATCACCATGTTGATGAACCTTTCGTGTGCTGA 1242 0.4316 MAKKAVLIGINYPGTKAELRGCVNDVWRMHKCLIERYGFSENDVTVLIDTDSSYTEPTGKNIRSALSDLVGSAEEGDVLFVHYSGHGTRLPAETGEDDDTGYDECIVPSDMNLITDDDFKEFVNGVPRGCRLTIVSDSCHSGGLIEEAKEQIGESTKGEEEHSGSGGFGLSGFLHRKVEDAIESRGFHVPSGLRSHPHRNEEENEDRDIELPHGVKNRSLPLSTLIDILKQKTGKEDINVGQLRPTLFDVFGEDASPKVKKFMNVILNKLQHGGGEGEQGGILGMVGSLAQEFLKAKLDGNDEGYAKPAMETKVENKHEVYAGSSKRGLPSGGILMSGCQTDQTSADACPSGNPANAYGAFSNAIQAIIQESDGAITYSELILKARQKLQKDGFTQKPGLYCSDHHVDEPFVC 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01676 413 PANTHER METACASPASE-4 2 411 - -
Trre15g01676 413 Pfam Caspase domain 3 404 IPR011600 GO:0004197|GO:0006508
Trre15g01676 413 MobiDBLite consensus disorder prediction 194 211 - -
Trre15g01676 413 Gene3D - 1 172 - -
Trre15g01676 413 Gene3D - 300 412 - -
Trre15g01676 413 SUPERFAMILY Caspase-like 6 127 IPR029030 -
Trre15g01676 413 MobiDBLite consensus disorder prediction 185 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01676 Trre-Chr15 13452977 13454860 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01676 - - gmx:100802658 660.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g01676 15 13452977 13454860 Trre15g01676 15 13452977 13454860 ECH