Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01642 ATGGTGCTTGCTGGTAAACTTACTTCTGAACTTGGAGTCAAAACACCCGCTGAAAGATTCTTCAAACTATTCTCATCAGAACTTCATGAATTGCAAAACGCTTGTGAAAGAATTCATCATACCAAGCTTCATGAAGGTGAAGACTGGCATGACACTGATTCGGTTAAACACTGGACTTATGTCATAGATGGTGAGGTACACACATGTTATGATAATCTTGAAGAAGTTGATGAACAGAACAAAAAGCTCAGATTCAAGTTATTCGGTGGAGATATTGATAAGCACTATAAAGTCTTTAAGCTTATCGTTCAAGTAATTGATAAGGGTGACCATGCTGGTGTTAAATGGACTATTGAATATGAGAAGATCAATGAAGATATTGATGCTCCAAATGGCTGGATGGACTATCTTAGCAAATGCACTAGAGATATTGATGCTCATCTTCTCAAAGGGGAAAAAGTGGCTCTATAA 471 0.3737 MVLAGKLTSELGVKTPAERFFKLFSSELHELQNACERIHHTKLHEGEDWHDTDSVKHWTYVIDGEVHTCYDNLEEVDEQNKKLRFKLFGGDIDKHYKVFKLIVQVIDKGDHAGVKWTIEYEKINEDIDAPNGWMDYLSKCTRDIDAHLLKGEKVAL 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01642 156 PANTHER POLYKETIDE CYCLASE/DEHYDRASE AND LIPID TRANSPORT SUPERFAMILY PROTEIN 1 150 - -
Trre15g01642 156 SMART Bet_v_1_2 2 151 IPR000916 GO:0006952
Trre15g01642 156 Gene3D - 1 150 IPR023393 -
Trre15g01642 156 SUPERFAMILY Bet v1-like 1 150 - -
Trre15g01642 156 Pfam Pathogenesis-related protein Bet v 1 family 3 150 IPR000916 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01642 Trre-Chr15 13175586 13176158 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01642 - - mtr:11407742 240.736