Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Trre15g01638 | ATGGTGCTCGCTGGAAAACTTAGTACCGAGCTAGGGATCAAAACTCCCACTGACAGGTTCTTCAAACTATTCTCATCCGAACTTCACGAAATGCAAAACATTTGTGAAAGAATTCATGCAACTAAGCTTCATGAAGGTGAAGATTGGCATGACACTGAGACGATTAAACACTGGACTTATGTCATAGATGGCGAGGTACACACATGCCATGAGAGTGTTGAGGAAGTTGATGAAAAGAACAAAAAGCTCAATTACAGGCTTTGGGGTGGAGATATTGATAAGCACTATAAGGTATTTAAGCTGATCATTGAAATAATTGATAAAAGTGATGGTATTGGTGCTCTTAAATGGACTATTGATTATGAGAAGATCAATGAAGATATTCATCCTCCAAATGGCTGGATGGAATACCTTACCACACTCACTAAAGATCTTGATGCTCATCTTGTCAAAGACACAAGGGTTACCATATAA | 474 | 0.3861 | MVLAGKLSTELGIKTPTDRFFKLFSSELHEMQNICERIHATKLHEGEDWHDTETIKHWTYVIDGEVHTCHESVEEVDEKNKKLNYRLWGGDIDKHYKVFKLIIEIIDKSDGIGALKWTIDYEKINEDIHPPNGWMEYLTTLTKDLDAHLVKDTRVTI | 157 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Trre15g01638 | 157 | Gene3D | - | 1 | 151 | IPR023393 | - | |
| Trre15g01638 | 157 | SMART | Bet_v_1_2 | 2 | 152 | IPR000916 | GO:0006952 | |
| Trre15g01638 | 157 | Coils | Coil | 155 | 157 | - | - | |
| Trre15g01638 | 157 | SUPERFAMILY | Bet v1-like | 1 | 151 | - | - | |
| Trre15g01638 | 157 | Pfam | Pathogenesis-related protein Bet v 1 family | 3 | 151 | IPR000916 | GO:0006952 | |
| Trre15g01638 | 157 | PANTHER | POLYKETIDE CYCLASE/DEHYDRASE AND LIPID TRANSPORT SUPERFAMILY PROTEIN | 1 | 151 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Trre15g01638 | Trre-Chr15 | 13106436 | 13107849 | Tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Trre15g01638 | - | - | psat:127075563 | 239.58 |