Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01563 ATGGATAGTGGAAGTGGAAACCGTCGTGGGTCTTCTTTTTCCCAATCACGGCGCCACAAATTCCCTTTCAGCGCTGCTTCTACAAATCAATCCAAAGTTTCTACTTTTTCTCAAAGGGTCATTCCTCCTCCTACAACTGGTACCAATACTAATGCATCTACCTCTCATTTCAAAGATCATGATGATATTCATGATGCACAAGGATCTTCCAATCTTGAGGTTTTACTTGGTACTTGTTCTTATATGTGCCCAGAAAGAGAGAGGATCCAGCGTGAGAAACTTCGAGATTTGGCAGTTTTTGAGAGGCTAAATGGTAATCCTTCAAAATCATCCCCAGCTCTTGCTGTCAAGAAGTTTTGCAGAACTATATCCATCAAAGATGTTCAAGCATCTGATATGCGGCCTCTTAATGTATTAGAAGATACTTTAAATTACCTTTTGGGCTTAGTGGATTCCAAGGAGCATCCGTTTGAAGTAGTTCATGACTTTATCTTTGATAGGACAAGGTCTATACGTCAAGATCTTACTATGCAAAATATTGTAAACAAGAAAGCAATCTACATGTATGAGGGAATGGTATTCTTTCAGATATCTTTGATTTATACGCTTTCTTCTCTTCATCATTTATCTATATGA 636 0.3821 MDSGSGNRRGSSFSQSRRHKFPFSAASTNQSKVSTFSQRVIPPPTTGTNTNASTSHFKDHDDIHDAQGSSNLEVLLGTCSYMCPERERIQREKLRDLAVFERLNGNPSKSSPALAVKKFCRTISIKDVQASDMRPLNVLEDTLNYLLGLVDSKEHPFEVVHDFIFDRTRSIRQDLTMQNIVNKKAIYMYEGMVFFQISLIYTLSSLHHLSI 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01563 211 PANTHER 80 KDA MCM3-ASSOCIATED PROTEIN 4 196 IPR045107 -
Trre15g01563 211 Pfam SAC3/GANP family 82 205 IPR005062 -
Trre15g01563 211 Gene3D - 129 209 - -
Trre15g01563 211 MobiDBLite consensus disorder prediction 1 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01563 Trre-Chr15 12510191 12513484 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01563 K23719 - gmx:100802804 251.521