Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01354 ATGGCGAGTGCTGTGAGTGCTGTGGATGGTGCTGGAAACCCGATCCCTACATCAGCGGTGTTGATGGCATCGTCGAAGCACATTGGGTTAAGGTGTCATTCGGAGAATTTGGAGTTTCTGAAATGTAAGAAGAAAGATCAAAATCCTGAAAAGTGTCTCGATAAAGGCCGTGATGTTACTCGATGTGTTCTTGGACTTCTCAAGGATCTACACCAAAAGTGCACAAAAGAGATGGATGATTACGTTGGTTGCATGTACTACCATACAAATGAGTTCGACTTATGCCGCAAAGAGCAGGAAGCATTTGAGAAAAAATGTTCTTTGGAATGA 330 0.4333 MASAVSAVDGAGNPIPTSAVLMASSKHIGLRCHSENLEFLKCKKKDQNPEKCLDKGRDVTRCVLGLLKDLHQKCTKEMDDYVGCMYYHTNEFDLCRKEQEAFEKKCSLE 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01354 109 ProSiteProfiles Coiled coil-helix-coiled coil-helix (CHCH) domain profile. 71 109 - -
Trre15g01354 109 Pfam CHCH domain 74 106 IPR010625 -
Trre15g01354 109 ProSiteProfiles Coiled coil-helix-coiled coil-helix (CHCH) domain profile. 29 70 - -
Trre15g01354 109 PANTHER NADH-UBIQUINONE OXIDOREDUCTASE 1 106 IPR016680 GO:0006120
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01354 Trre-Chr15 10497807 10503908 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01354 K03952 - gmx:100527451 216.468