Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01337 ATGACCTCAGAATCACACTGCTACTGCTGCATTTCCCACCAATTCTTCCAAACAGCATCCACAAACCCTAACAAAATCGCCGTAATCCATGCTTCCTCCGTCGCCAACCAATCCACTTCCCCAAACTTCAACGGAGACATTACCACGCTCTTACAACAGCGCGTTGAATCCACTTCTCCGCCACTCTACCACGGTGATCGTAGCTTCACTTACTCTCATCTCTTCACCGCTGTTTCTTCTCTCAGCTCTCGTCTCCGCTCTATTCTTAATGGTGCTGATCACCCGCACCTGATCACATCCAAACCTCAAGGTAAAGATGGTGTCCACTGTGAAGAGGGAGCTGTTCAGATATCCGAGTCCTTGAAAACCGTCAAGCCTAGTGCAGAGTCAAGGGTTAACTCCAGCGAAGAGTATAAGCCAAAGATAGTGGGGATATATATGCCTCCTTCTGTTGAATATATTATTGCTGTTCTTTCGGTATTGAGGTGTGGGGAAGCCTTCTTACCTTTGGATCCTTTTTGGCCGAACGAAAGGATACTGTCAGTTGCTTCTTCTTCAAATGCTGATCTCATTATAGGGTCCGAATCTTCATTTGGTAACAGTAATTTGGACCAGCTTGATGAATCGCATTGGCTGGTAAAGTTGATTAGTTGTCCTGTTTTGAGCTACTCCATTGAAGAAAAGCTGCAAGAATGTAGTTGTTCAACAGATTTGCCGTGGCCTTGTGCCAATGAAAAGAAAAGATCTTTTTGTTATCTGATGTATACTTCTGGATCATCTGGCAAGCCTAAAGGAGTGTGTGGTACTGAACAAGGTCTTTCAAACCGATTTTTATGGATGCAAGGAATGTATCCTTTGACGGGGCAAGAGCTGTTGTTGTTTAAGTCGTCAATTAGCTTCATTGACCACCTGCAAGAATTTATCAGTTCTATTTTGACTGCCTGTGTATTAATTATTCCTCCTTTCAGCGAGCTCAAAGAAAATGTATATTCCATAATAGATTTTCTACAGGCTTATTCTGTTAATAGGCTTACTGCTGTTCCATCACTAATAAGAACAATTCTTCCTGTATTGCAAACTCGTGCTGACATGCATGTTGAATGTTCGCTGAAGTTGCTTGTGCTAAGTGGTGAAACTTTTCCTTTTTCCTTGTGGGAGATGCTTACAACTATATTACCAAAGACAACAATCTTGAACTTATACGGAAGTACCGAGGTCGCTGGTGATTGTACATATTTTGATTGCAAGAGGATACCATTGGTTTTGAAGGAAGAAATGCTAACAAGTGTTCCAATAGGTTTACCCATTACTAATTGCAATGTACAACTTATTGGTGAAAATAGTGCATCAAATGAGGGTGAGCTATACGTTGGTGGTTCTTGCATTTTTAGGGGTTACTACAATGAATTTGATGGATTTGTAAAATTGCCTCAAAGTTATGGTTGTGAAGATATTGTTGATGCTTGCCAAAGCCAATTATATTTTAAAACTGGTGATCTAGTCAAACAGTTGCCAAGTGGTGATTTTATATTCTTGGGAAGAAAAGACCGTATTGTAAAAATCCATGGGCAACGTATTGCCCTGGAAGAAATTGAAAATTTTCTAAGGGAACATCCATGTATAAATGATGCTGCTGTAGTTTGTCGAAATCTTCAAGCAGAGCTTGTGCTTATTGAAGCTTTTATAATATTGAAGGACAAACAACAATTGGGTGAATTATTAGTACCTGGAATCAGGAGTTGGATGAGTAACAAACTTCCATCAGTTGTGCTCCCTAACCGTTTCATCTTTACAGAATCATTTCCTATGTCTTCTAGTGGTAAGATTAATTATGAGTCATTGGTTAGCTCAGCATTATTAACTAAGAATGTCAGGGATAAGATTGGCAACATTAGCTGTAGTGATCTACTGCAACTTATTAAAAAGGCGTTTCACGGTGCTTTAATGGTTGAAAAGTTATGCAATGGTGATGATTTCTTTACGATGGGTGGTAACTCTCTTTCTGCTGCACATGTTGCTTACAATTTGGGGATTGACTTGAGATTTCTTTACTACTATCCAACTCCTTTTAAGCTTTGTATGGCTCTTCTCCAAAAAAGAGGATTGTGTTCTTTGCATAACAACTTGGATAAATGTTTGCAATTAGACGCAGACATACAAAATAACCATTTATCTTCCAATCATACGGAAAATTCAATTCCTCTTCAGTCAAGAATGATTCCTAAAGATAATTTTGATGTTTTGTTCCCTTCTAAGTGCTTAAAAAGGGATTCTACAGATGTTACATCAGGGGGAAATGAACCATTTCCTTGGCATTCCCCTTCAATATTCTCATCATCTTCATTTAGCCGATGCAACAAGGTGTTGTATGAAGGGAAAACTTCTGTAATGGATACACACCAAACAACAACTTGGTCAGTCAATGCTCCAAGAGGAAGCAAAGGTCACATGAAGAGCTTTTGGAAAGTTAACATGGAATCTTGTGTTGATGCTTCTCCCATGGTTGTGTCTAAAGGCTCAGATATTTATTTATTCATTGGATCTCACTCACACAAATTTCTCTGCATAAATGCTAGAAGTGGTTCTATGCAGTGGGAGATCAAACTAGAAGGTCGGATTGAATGTACATCAGCAATTGTTTCTGATTTTTCCCAGGTGGTTGTTGGATGTTACATGGGAAAAATCTATTTTCTTGATTTTTGGAATGGACAAATCTACTGGATTTTTCAAACATCTGGTGAGGTTAAATCACAGCCAGTTATAGACACATGCAGACAATTGATCTGGTGTGGCTCGTATGATCATAACTTATATGCCCTTGATTTCAAAAATCATTGTTGTGTCTATAAGCTACCATGTGGAGGTAGTATATATGGGTCACCTGCAATTGATGAGGCTCGCAGCGTGCTTTATGTGGCCTCCACCGGTGGTCGTATAACAGCTGTATCGATATCAGCTTCGCCTTTTAGTATATTGTGGCTACTTGAATTAGAAGTACCCGTGTTTGGTTCTCTGGCTGTCACCCAAAATGGAACTGTAATATGTGGCTTGGTAGATGGCCATGTTCTTGCATTGGATCCAAACGGGTCCATCATTTGGAAGAAAACAACTGGTGGTCCAATTTTCGCTGGGCCGTGCATACCATATTCTCTTCCGCATGAGGTACTTGTATGCTGCAGAAATGGAAGTGTGTACTCGTTCCAACTGGAAAAGGGAGATCTAATATGGGAATACAATGTTGGAGATCCAATTACTGCATCTGCTTATGTTGACGAGCACTTGCAGCTGGAATCTGATGCCTCCAACACTTTGGACAGGTTAATTTGCATTTGTTCTAGTTCCGGAAACATACACATTCTTCGAGTGAACACAAATTTATCCGAAGATACAAATCAACTAACAAGCGAAGTGCAAGAATTTGCAAGACTTAACTTGCCGGGGGATATATTCTCGTCACCTTTAATGATTGGTGGCCGGATTTTCGTTGGTTGTAGGGATGATTACTTGCACTGTGTTTCCCTTGAAATTCCAATGCAACATGGAACTTAA 3549 0.399 MTSESHCYCCISHQFFQTASTNPNKIAVIHASSVANQSTSPNFNGDITTLLQQRVESTSPPLYHGDRSFTYSHLFTAVSSLSSRLRSILNGADHPHLITSKPQGKDGVHCEEGAVQISESLKTVKPSAESRVNSSEEYKPKIVGIYMPPSVEYIIAVLSVLRCGEAFLPLDPFWPNERILSVASSSNADLIIGSESSFGNSNLDQLDESHWLVKLISCPVLSYSIEEKLQECSCSTDLPWPCANEKKRSFCYLMYTSGSSGKPKGVCGTEQGLSNRFLWMQGMYPLTGQELLLFKSSISFIDHLQEFISSILTACVLIIPPFSELKENVYSIIDFLQAYSVNRLTAVPSLIRTILPVLQTRADMHVECSLKLLVLSGETFPFSLWEMLTTILPKTTILNLYGSTEVAGDCTYFDCKRIPLVLKEEMLTSVPIGLPITNCNVQLIGENSASNEGELYVGGSCIFRGYYNEFDGFVKLPQSYGCEDIVDACQSQLYFKTGDLVKQLPSGDFIFLGRKDRIVKIHGQRIALEEIENFLREHPCINDAAVVCRNLQAELVLIEAFIILKDKQQLGELLVPGIRSWMSNKLPSVVLPNRFIFTESFPMSSSGKINYESLVSSALLTKNVRDKIGNISCSDLLQLIKKAFHGALMVEKLCNGDDFFTMGGNSLSAAHVAYNLGIDLRFLYYYPTPFKLCMALLQKRGLCSLHNNLDKCLQLDADIQNNHLSSNHTENSIPLQSRMIPKDNFDVLFPSKCLKRDSTDVTSGGNEPFPWHSPSIFSSSSFSRCNKVLYEGKTSVMDTHQTTTWSVNAPRGSKGHMKSFWKVNMESCVDASPMVVSKGSDIYLFIGSHSHKFLCINARSGSMQWEIKLEGRIECTSAIVSDFSQVVVGCYMGKIYFLDFWNGQIYWIFQTSGEVKSQPVIDTCRQLIWCGSYDHNLYALDFKNHCCVYKLPCGGSIYGSPAIDEARSVLYVASTGGRITAVSISASPFSILWLLELEVPVFGSLAVTQNGTVICGLVDGHVLALDPNGSIIWKKTTGGPIFAGPCIPYSLPHEVLVCCRNGSVYSFQLEKGDLIWEYNVGDPITASAYVDEHLQLESDASNTLDRLICICSSSGNIHILRVNTNLSEDTNQLTSEVQEFARLNLPGDIFSSPLMIGGRIFVGCRDDYLHCVSLEIPMQHGT 1182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01337 1182 Gene3D - 100 515 IPR042099 -
Trre15g01337 1182 SMART ire1_9 836 868 IPR018391 -
Trre15g01337 1182 SMART ire1_9 1005 1036 IPR018391 -
Trre15g01337 1182 SMART ire1_9 877 910 IPR018391 -
Trre15g01337 1182 SMART ire1_9 1049 1079 IPR018391 -
Trre15g01337 1182 FunFam Putative acyl-activating enzyme 19 807 986 - -
Trre15g01337 1182 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 817 1175 IPR011047 -
Trre15g01337 1182 CDD A_NRPS 141 614 - -
Trre15g01337 1182 Gene3D - 787 984 IPR015943 GO:0005515
Trre15g01337 1182 Gene3D - 985 1175 IPR015943 GO:0005515
Trre15g01337 1182 Pfam AMP-binding enzyme C-terminal domain 530 608 IPR025110 -
Trre15g01337 1182 Gene3D - 516 625 IPR045851 -
Trre15g01337 1182 Pfam AMP-binding enzyme 142 521 IPR000873 -
Trre15g01337 1182 FunFam Putative acyl-activating enzyme 19 987 1175 - -
Trre15g01337 1182 Pfam PQQ-like domain 903 942 IPR002372 -
Trre15g01337 1182 ProSitePatterns Putative AMP-binding domain signature. 253 264 IPR020845 -
Trre15g01337 1182 PANTHER BETA-ALANINE-ACTIVATING ENZYME 6 1175 - -
Trre15g01337 1182 Pfam PQQ-like domain 967 1173 IPR002372 -
Trre15g01337 1182 SUPERFAMILY Acetyl-CoA synthetase-like 65 615 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01337 Trre-Chr15 10352247 10364416 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g01337 252 609 Acyl Lipid Metabolism Gene Families AT5G36880 22.376 1.28e-13 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01337 K00142 - gmx:100820175 1875.14