Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01336 ATGATGGCCAGCCCAGAAACTGCGAGTTCAGTTGGAGAGAGTATGCCAGTCGGTGCTGCCCCCAGGAAGCCTCGGATTTTACTTGCTACTAGTGGAAGTGTTGCTGCTGTTAAGTTTGCAAATCTTTGTCATTGTTTCTCTGAATGGGCAGAAGTAAGAGCAGTTGCCACAAGTTCATCTTTGCATTTTATTGACCGAACTACGATTCCCAAAGATGTGATATTGTATACGGACGAGGATGAATGGTCTAGTTGGAAGAAACTAGGCGATAGTGTGCTTCACATTGAGCTTCGCAAATGGGCTGATATCATGGTCATTGCTCCATTATCGGCAAACACTCTTGGAAAGATTGCTGGAGGCTTGTGTGACAATCTACTGACATGTATTGTGAGAGCCTGGGACTACAGCAAACCATTCTTTGTTGCACCAGCCATGAACACTTTTATGTGGAACAATCCTTTCACAGAGCGGCATCTCATCTCCATTGACGAGCTTGGTATTTCTCTCATTCCACCTGTTACAAAGAGGTTAGCTTGTGGGGATTATGGCAATGGTGCAATGGCTGAACCTTCTACTATTTACTCCACTGTAAGGCTCTTCTATGAGTCAAAGGCTCAGCAAGGTAACGACGATGTTTAA 639 0.4476 MMASPETASSVGESMPVGAAPRKPRILLATSGSVAAVKFANLCHCFSEWAEVRAVATSSSLHFIDRTTIPKDVILYTDEDEWSSWKKLGDSVLHIELRKWADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWDYSKPFFVAPAMNTFMWNNPFTERHLISIDELGISLIPPVTKRLACGDYGNGAMAEPSTIYSTVRLFYESKAQQGNDDV 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01336 212 FunFam Phosphopantothenoylcysteine decarboxylase 19 210 - -
Trre15g01336 212 Pfam Flavoprotein 25 198 IPR003382 GO:0003824
Trre15g01336 212 Gene3D - 23 212 IPR036551 GO:0003824
Trre15g01336 212 SUPERFAMILY Homo-oligomeric flavin-containing Cys decarboxylases, HFCD 23 200 IPR036551 GO:0003824
Trre15g01336 212 PANTHER HOMO-OLIGOMERIC FLAVIN CONTAINING CYS DECARBOXYLASE FAMILY 16 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01336 Trre-Chr15 10346776 10347872 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01336 K01598 - gmx:100499989 394.43