Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01327 ATGGCAAACAACAACAACATCATTGAACAATCCTCAAAAAGTAATAATCTCCCAAAAGTCTTCCTTCACGGTCCTCCCAAATACTCCACAGTCCTCCAACCCAATCCTTCTCACAACTTCCATATCCTTAACCCGTCATCTCATCCCCCACTCCATGAATTCATAGCTCTTAATCCTCACAATGCCTCTTCCATCGCCGCCATTGTCTGTACCGGCGGCTGCCCCGTTAAAGCTGATGTCCTCCAACTTCTCCCCTCCCTCCGTCTTGTTTGCACCCCTAGCGCCGGAACTAATCACATTGATCTCTCCGAGTGTCGTCGTCGGGGTATCCAGGTTGCCAGTGCAGGAAGTATTTTCTCTGAAGATGTTGCTGATATGGCTGTGGCTTTGCTGATTGATGTTTGCAGGAAAATTTCAGTGGCAGATCGGTTCTTGAGAAGTCAACTTCAGAATCAGAATGCGCCTTGGGATTTTCCACTTGGTTCTAAGTTAACAGGAAAAAAGATTGGAATTGTTGGCATGGGAAGAATTGGCTTAGAAGTTGCAAAGAGACTTGAAGCATTCAATTGCATGATATCATACAACTCTAGGAACAAAAAACCATTACTTTCATACCCTTTCTATTCAACTGTCTTAGAACTTGCCACTAACACCAATGTACTTATTCTCTGTTGTGATCTAAACGACCAAACAAGGCACATTGTCAACAAAGATGTTATGTTAGCATTAGGAAAAAGAGGAATCATAGTAAATGTTGGAAGAGGAGCACTCATTGATGAAAATGAATTGTTAAAGTGTTTAATTGAAGGTGAAATTGGAGGTGCTGGTTTGGATGTGTTTGAAAATGAACCTCATGTTCCTAAAGAGTTCTTTTCTTTGGATAATGTTGTTTTGTCACCTCATAAAGGTGCCTTAACTTCAGAGTCTTTGATTGGTATTTCCCAACTTGTGGAACAAAATTTAGAAGCTTTCTTTTCAAACAAGCCTCTGATTACTCCAGTTATATAG 1008 0.4107 MANNNNIIEQSSKSNNLPKVFLHGPPKYSTVLQPNPSHNFHILNPSSHPPLHEFIALNPHNASSIAAIVCTGGCPVKADVLQLLPSLRLVCTPSAGTNHIDLSECRRRGIQVASAGSIFSEDVADMAVALLIDVCRKISVADRFLRSQLQNQNAPWDFPLGSKLTGKKIGIVGMGRIGLEVAKRLEAFNCMISYNSRNKKPLLSYPFYSTVLELATNTNVLILCCDLNDQTRHIVNKDVMLALGKRGIIVNVGRGALIDENELLKCLIEGEIGGAGLDVFENEPHVPKEFFSLDNVVLSPHKGALTSESLIGISQLVEQNLEAFFSNKPLITPVI 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01327 335 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 128 303 IPR006140 GO:0051287
Trre15g01327 335 PANTHER 2-HYDROXYACID DEHYDROGENASE-RELATED 18 330 - -
Trre15g01327 335 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 51 147 - -
Trre15g01327 335 Gene3D - 120 306 - -
Trre15g01327 335 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 120 304 IPR036291 -
Trre15g01327 335 Gene3D - 40 329 - -
Trre15g01327 335 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 63 334 IPR006139 GO:0016616|GO:0051287
Trre15g01327 335 CDD HPPR 18 326 - -
Trre15g01327 335 FunFam Putative 2-hydroxyacid dehydrogenase 120 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01327 Trre-Chr15 10279163 10281474 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01327 K15919 - gmx:100777313 435.647