Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01324 ATGGACAAAAACCTTCCAAAAGTGCTTATTCTTGGTCCACCACCGTGCTTCTCAACCTTCGAATCACTTTACTCTCACAAGTTCAATTTCGTTAACCCCAAAACCTCAAACCTTCCACTTCAACAATTCATGCTCACTCACCGCCACAACCCATCAACAATTCCCGCCATATTCTGCAGCGCCGCATATTCCATAACCACTGAAATCCTCGATTTCCTTCCATCGCTCCGTCTAGTCGTCACCTCCAGTGTTGGAACTGACCACATTGACCTTCACGAATGTTCTCGCCGTGGAATTCAGGTCGCTGGTGCCGGAGGAGTTTTGTCGGAGGATGTGGCTGATTCGGCGGTGGCATTGCTTATTGCTGTTATGAGAAAAGTGACGGTGGCAGATCGATATGTGAGGACGCAGCGGGATCATTCTGGCCCTTGGGATTTTCCCCTTGGCTATAAGTTATCAGGCAAGCGAGTTGGAATTGTTGGATTGGGAAGTATTGGCATAGGAGTTGCAAAGCGGCTGGAGTCATTTGATTGCACTATCTCGTACCATTCTAGGCATAAAAAAACATCAATTTCATACCCTTTCTATTCCAACGTTGTTGATCTCGCAACTTCTAGTGACGCACTTGTGGTGTGTTGTGCACTAAATAACGAAACACGGCACATAATAAATAGGGAAGTCCTTTTAGCATTAGGAGCAAAAGGGTTTATTGTAAATGTTGGAAGAGGAAGTCTTATTGATGAAAAGCAATTGATCAAGTGTTTGATGGAAGGAGAAATTGGAGGTGCTGGTTTGGATGTGTTTGAGAATGAACCTCATGTTTCTGAAGAGTTCTTTTCATTGGATAATGTGGTTTTATCTCCACATTCAGCTGCTTGTACTACTGAATCAACATTGAGTTTGTGTGAACTTGTGGCTGGGAATTTTGAAGCTTTCTTCTTAAATAAGCCACTGATTAGTCCAGTTGTGTTAGCTGAGTAA 981 0.4353 MDKNLPKVLILGPPPCFSTFESLYSHKFNFVNPKTSNLPLQQFMLTHRHNPSTIPAIFCSAAYSITTEILDFLPSLRLVVTSSVGTDHIDLHECSRRGIQVAGAGGVLSEDVADSAVALLIAVMRKVTVADRYVRTQRDHSGPWDFPLGYKLSGKRVGIVGLGSIGIGVAKRLESFDCTISYHSRHKKTSISYPFYSNVVDLATSSDALVVCCALNNETRHIINREVLLALGAKGFIVNVGRGSLIDEKQLIKCLMEGEIGGAGLDVFENEPHVSEEFFSLDNVVLSPHSAACTTESTLSLCELVAGNFEAFFLNKPLISPVVLAE 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01324 326 CDD HPPR 6 313 - -
Trre15g01324 326 ProSitePatterns D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 157 184 IPR029752 -
Trre15g01324 326 FunFam Putative 2-hydroxyacid dehydrogenase 109 294 - -
Trre15g01324 326 Gene3D - 51 317 - -
Trre15g01324 326 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 117 291 IPR006140 GO:0051287
Trre15g01324 326 Gene3D - 109 294 - -
Trre15g01324 326 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 109 292 IPR036291 -
Trre15g01324 326 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 50 137 - -
Trre15g01324 326 PANTHER 2-HYDROXYACID DEHYDROGENASE-RELATED 5 318 - -
Trre15g01324 326 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 56 322 IPR006139 GO:0016616|GO:0051287
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01324 Trre-Chr15 10261293 10263347 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01324 K15919 - gmx:100776772 456.447
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g01324 15 10261293 10263347 Trre15g01324 15 10261293 10263347 ECH