Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01314 ATGAGCGACGGAGGTCCAAAAAGACAAGGCGGCAGGCCATTGCCTCCGCCACCAAGAGGCCCCCCTCCTCCATCCTTCCGCCCCCGCCTCGAACCAGTCGATCGTGAAAAGACTTGCCCCTTGCTTCTCCGTGTATTCACTAAGATAGGAAATCATCATTCAATGGATGATTTTTCTGTTAGAGGAAAAGAGCCTAAAGATGAAGTTCAGATTTATACCTGGAAAGATGCCACTCTCAGAGAATTAACCGATCTTGTCAAAGAAGTGGCTCCTGCTGCAAGAAGAAGAAATGCAAAGCTCTCTTTTGCTTTCGTGTTTCCTGATAAAAATGGCCGTTTCAAAGTTCAAGAGGTGGGCAAGACTTTATCTTATGGAAATGGAAGATTAGATGACGGCAAGGCATTAGCTGATCTTGGTTTTGAGATTGGTGATTACTTGGATGTGGCTATTATATAG 456 0.4518 MSDGGPKRQGGRPLPPPPRGPPPPSFRPRLEPVDREKTCPLLLRVFTKIGNHHSMDDFSVRGKEPKDEVQIYTWKDATLRELTDLVKEVAPAARRRNAKLSFAFVFPDKNGRFKVQEVGKTLSYGNGRLDDGKALADLGFEIGDYLDVAII 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01314 151 FunFam Histone deacetylase complex subunit SAP18 24 151 - -
Trre15g01314 151 MobiDBLite consensus disorder prediction 1 34 - -
Trre15g01314 151 Pfam Sin3 associated polypeptide p18 (SAP18) 32 150 IPR010516 -
Trre15g01314 151 PANTHER SAP18 19 151 IPR010516 -
Trre15g01314 151 Gene3D ASAP complex, SAP18 subunit 25 151 IPR042534 -
Trre15g01314 151 MobiDBLite consensus disorder prediction 10 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01314 Trre-Chr15 10220386 10223530 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01314 K14324 - gmx:100526922 252.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g01314 15 10220386 10223530 Trre15g01314 15 10220386 10223530 ECH